Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2419

Experiment: Paraquat dichloride 0.016 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.016 mg/mL
2,741,918	-				+1.4
2,741,918	-				-0.3
2,741,918	-				+0.9
2,741,918	-				+1.2
2,741,947	+				-1.6
2,741,947	+				-1.3
2,741,947	+				-0.7
2,741,948	-				-0.5
2,741,948	-				-0.4
2,741,948	-				-1.5
2,742,002	+				-2.9
2,742,002	+				-0.1
2,742,003	-				-0.5
2,742,035	+				-2.9
2,742,035	+				-1.7
2,742,035	+				-4.1
2,742,035	+				-2.2
2,742,036	-				+0.1
2,742,036	-				+0.3
2,742,036	-				-1.9
2,742,036	-				-2.1
2,742,036	-				-0.9
2,742,163	+		Pf1N1B4_2418	0.27	-0.9
2,742,163	+		Pf1N1B4_2418	0.27	+0.3
2,742,164	-		Pf1N1B4_2418	0.27	-1.3
2,742,164	-		Pf1N1B4_2418	0.27	-2.8
2,742,194	+		Pf1N1B4_2418	0.32	-0.5
2,742,195	-				+1.9
2,742,322	-		Pf1N1B4_2418	0.54	-1.1
2,742,407	+		Pf1N1B4_2418	0.68	-1.9
2,742,408	-		Pf1N1B4_2418	0.69	-0.8
2,742,408	-		Pf1N1B4_2418	0.69	-0.7
2,742,408	-		Pf1N1B4_2418	0.69	-2.0
2,742,450	-				+0.9
2,742,450	-		Pf1N1B4_2418	0.76	-4.7
2,742,538	+				-0.5
2,742,538	+				-0.9
2,742,627	+				-3.5
2,742,627	+				-2.8
2,742,627	+				+0.9
2,742,627	+				-1.5
2,742,628	-				+5.8
2,742,628	-				+5.9
2,742,657	-				+4.6
2,742,657	-				+6.0
2,742,657	-				+5.9
2,742,732	+				-1.7
2,742,738	+				-1.6
2,742,738	+				-2.8
2,742,738	+				-1.1
2,742,738	+				-0.7
2,742,738	+				-1.1
2,742,738	+				-0.9
2,742,738	+				-2.7
2,742,738	+				-1.7
2,742,738	+				-2.4
2,742,739	-				+4.9
2,742,739	-				+5.8
2,742,739	-				+5.7
2,742,739	-				+6.8
2,742,739	-				+6.2
2,742,739	-				+1.9
2,742,739	-				+6.5
2,742,739	-				+5.3
2,742,739	-				+7.0
2,742,739	-				+5.7
2,742,739	-				+6.1
2,742,739	-				+5.1
2,742,739	-				+5.9
2,742,739	-				+6.1
2,742,739	-				+5.8
2,742,739	-				+3.0
2,742,739	-				+6.3
2,742,824	+				-0.9
2,742,824	+				+0.3
2,742,824	+				-0.9
2,742,824	+				-2.3
2,742,824	+				+0.3
2,742,824	+				-0.7
2,742,825	-				+5.1
2,742,825	-				+6.5
2,742,825	-				+6.6
2,742,825	-				+5.9
2,742,825	-				+6.1
2,742,825	-				+6.9
2,742,825	-				+6.0
2,742,825	-				+6.2
2,742,826	+				-1.8
2,742,827	-				+6.3
2,742,827	-				+5.9
2,742,827	-				+5.6
2,742,827	-				+4.8
2,742,827	-				+5.5
2,742,933	+				+4.4
2,742,934	-				+5.3
2,742,934	-				+5.1
2,742,936	+				+3.6
2,742,937	-				+5.8
2,742,980	+				+4.4
2,742,980	+				+5.4
2,742,980	+				+4.4
2,742,980	+				+4.7
2,742,981	-				+5.9
2,742,981	-				+6.2
2,742,981	-				+5.5
2,742,981	-				+6.5
2,742,981	-				+6.0
2,742,981	-				+3.9
2,742,981	-				+6.2
2,742,981	-				+6.5
2,742,981	-				+6.3
2,742,981	-				+6.5
2,742,981	-				+6.8
2,743,005	+				+5.9
2,743,006	-				+6.7
2,743,097	+				+5.2
2,743,097	+				+5.0
2,743,097	+				+6.2
2,743,097	+				+5.6
2,743,097	+				+5.2
2,743,098	-				+6.1
2,743,098	-				+5.0
2,743,098	-				+6.7
2,743,098	-				+4.8
2,743,098	-				+6.8
2,743,098	-				+6.8
2,743,098	-				+5.1
2,743,098	-				+6.0
2,743,098	-				+7.7
2,743,098	-				+3.4
2,743,098	-				+6.3
2,743,118	+		Pf1N1B4_2419	0.10	+4.4
2,743,119	-		Pf1N1B4_2419	0.10	+6.6
2,743,202	+		Pf1N1B4_2419	0.14	+6.5
2,743,203	-		Pf1N1B4_2419	0.14	+5.0
2,743,203	-		Pf1N1B4_2419	0.14	+6.1
2,743,203	-		Pf1N1B4_2419	0.14	+6.3
2,743,256	+		Pf1N1B4_2419	0.17	+5.4
2,743,286	+		Pf1N1B4_2419	0.18	+4.9
2,743,286	+		Pf1N1B4_2419	0.18	+5.1
2,743,286	+		Pf1N1B4_2419	0.18	+3.7
2,743,385	+		Pf1N1B4_2419	0.23	+5.2
2,743,385	+		Pf1N1B4_2419	0.23	+6.3
2,743,386	-		Pf1N1B4_2419	0.23	+5.4
2,743,386	-		Pf1N1B4_2419	0.23	+4.8
2,743,386	-		Pf1N1B4_2419	0.23	+5.3
2,743,386	-		Pf1N1B4_2419	0.23	+7.1
2,743,386	-		Pf1N1B4_2419	0.23	+6.0
2,743,386	-		Pf1N1B4_2419	0.23	+6.9
2,743,412	+		Pf1N1B4_2419	0.25	+5.2
2,743,413	-		Pf1N1B4_2419	0.25	+5.9
2,743,430	-		Pf1N1B4_2419	0.26	+5.8
2,743,847	+		Pf1N1B4_2419	0.46	+5.5
2,743,847	+		Pf1N1B4_2419	0.46	+5.5
2,743,847	+		Pf1N1B4_2419	0.46	+4.0
2,743,847	+		Pf1N1B4_2419	0.46	+5.6
2,743,848	-		Pf1N1B4_2419	0.46	+5.8
2,743,848	-		Pf1N1B4_2419	0.46	+5.0
2,743,848	-		Pf1N1B4_2419	0.46	+4.3
2,743,853	+		Pf1N1B4_2419	0.47	+5.0
2,743,853	+		Pf1N1B4_2419	0.47	+3.0
2,743,854	-				+6.1
2,743,854	-		Pf1N1B4_2419	0.47	+6.9
2,743,907	+		Pf1N1B4_2419	0.49	+4.5
2,743,907	+		Pf1N1B4_2419	0.49	+4.5
2,743,960	+				+4.3
2,743,961	-		Pf1N1B4_2419	0.52	+5.1
2,744,132	+		Pf1N1B4_2419	0.61	+5.0
2,744,132	+		Pf1N1B4_2419	0.61	+4.0
2,744,133	-		Pf1N1B4_2419	0.61	+5.7
2,744,150	+		Pf1N1B4_2419	0.61	+4.0
2,744,150	+		Pf1N1B4_2419	0.61	+5.2
2,744,706	-				+5.3
2,744,706	-		Pf1N1B4_2419	0.89	+4.6
2,744,706	-		Pf1N1B4_2419	0.89	+4.3
2,744,804	+				+2.7
2,744,804	+				+4.3
2,744,804	+				+4.3
2,744,805	-				-0.6
2,744,805	-				+5.4
2,744,828	+				+5.0
2,744,828	+				+4.9
2,744,915	+				+2.4
2,744,916	-				+4.3
2,744,917	+				+3.5
2,744,917	+				+3.0
2,744,917	+				+3.9
2,744,917	+				+3.3
2,744,917	+				+4.5
2,744,918	-				+5.7
2,744,918	-				+5.8
2,745,154	-				+0.9
2,745,154	-				+0.4
2,745,473	+		Pf1N1B4_2420	0.30	+0.3
2,745,473	+		Pf1N1B4_2420	0.30	+1.2
2,745,474	-		Pf1N1B4_2420	0.30	-0.8
2,745,474	-		Pf1N1B4_2420	0.30	-0.5
2,745,474	-		Pf1N1B4_2420	0.30	+0.4
2,745,474	-		Pf1N1B4_2420	0.30	+0.5
2,745,474	-		Pf1N1B4_2420	0.30	+0.5
2,745,474	-		Pf1N1B4_2420	0.30	-0.1
2,745,474	-		Pf1N1B4_2420	0.30	-0.1
2,745,474	-		Pf1N1B4_2420	0.30	-0.6
2,745,513	+		Pf1N1B4_2420	0.33	+0.4
2,745,514	-		Pf1N1B4_2420	0.33	+0.3
2,745,514	-		Pf1N1B4_2420	0.33	+1.1
2,745,555	+		Pf1N1B4_2420	0.37	-0.1