Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1750

Experiment: Paraquat dichloride 0.016 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.016 mg/mL
2,000,457	-		Pf1N1B4_1748	0.53	+0.3
2,000,472	-		Pf1N1B4_1748	0.55	-0.9
2,000,578	+		Pf1N1B4_1748	0.72	+0.7
2,000,579	-		Pf1N1B4_1748	0.72	-0.5
2,000,645	-		Pf1N1B4_1748	0.82	+1.0
2,000,690	+		Pf1N1B4_1748	0.89	+0.0
2,000,690	+		Pf1N1B4_1748	0.89	-0.5
2,000,690	+		Pf1N1B4_1748	0.89	-0.5
2,000,691	-		Pf1N1B4_1748	0.89	+0.8
2,000,691	-		Pf1N1B4_1748	0.89	-0.5
2,000,691	-		Pf1N1B4_1748	0.89	+0.0
2,000,691	-		Pf1N1B4_1748	0.89	+1.0
2,000,691	-		Pf1N1B4_1748	0.89	-1.4
2,000,691	-		Pf1N1B4_1748	0.89	-1.9
2,000,758	+				-0.9
2,000,758	+				+0.7
2,000,759	-				+0.5
2,000,761	+				-0.1
2,000,761	+				-1.7
2,000,761	+				-0.5
2,000,761	+				+1.0
2,000,762	-				+1.0
2,000,762	-				+0.0
2,000,762	-				+0.0
2,000,762	-				-0.8
2,000,762	-				-0.7
2,000,762	-				-0.1
2,000,762	-				-1.4
2,000,762	-				-1.5
2,000,762	-				+1.5
2,000,762	-				-0.5
2,000,762	-				-0.1
2,000,762	-				+0.5
2,000,762	-				-1.0
2,000,762	-				+0.5
2,000,828	+				+0.6
2,000,828	+				+0.7
2,000,828	+				-0.1
2,000,828	+				-0.2
2,000,829	-				-1.1
2,000,829	-				+1.0
2,000,920	+				-0.1
2,000,920	+				-1.4
2,000,920	+				+0.2
2,000,921	-				+1.0
2,000,921	-				+0.9
2,000,921	-				-0.3
2,000,921	-				+0.5
2,000,942	+				-0.5
2,000,942	+				-0.3
2,000,942	+				+2.0
2,000,943	-				-2.0
2,000,943	-				+0.8
2,000,943	-				+2.0
2,000,953	+				-1.0
2,000,953	+				-0.0
2,000,953	+				-0.2
2,000,953	+				+0.6
2,000,953	+				-1.5
2,000,953	+				-1.0
2,000,953	+				+0.2
2,000,953	+				+1.6
2,000,953	+				+0.5
2,000,953	+				-1.7
2,000,953	+				-0.6
2,000,953	+				+0.4
2,000,953	+				-1.5
2,000,953	+				-0.3
2,000,953	+				-0.3
2,000,953	+				-0.3
2,000,953	+				+0.0
2,000,953	+				-1.0
2,000,954	-				+0.8
2,000,954	-				+0.7
2,000,954	-				-0.1
2,000,954	-				+0.2
2,000,954	-				+1.0
2,000,954	-				+0.3
2,000,954	-				+0.6
2,000,954	-				+0.7
2,000,954	-				+1.3
2,000,954	-				+0.6
2,000,954	-				+0.2
2,000,954	-				-1.0
2,000,954	-				-1.7
2,000,954	-				+0.0
2,000,954	-				+0.5
2,000,954	-				+1.4
2,000,954	-				-1.8
2,000,954	-				+1.9
2,000,954	-				-0.3
2,000,955	+				-0.5
2,000,955	+				+0.5
2,000,955	+				+0.2
2,000,956	-				+2.6
2,000,956	-				+0.2
2,000,956	-				+1.0
2,000,957	+				-1.3
2,000,957	+				+1.5
2,000,957	+				+0.2
2,000,957	+				+0.0
2,000,957	+				+0.4
2,000,957	+				-0.7
2,000,957	+				-1.2
2,000,958	-				-0.1
2,000,958	-				+0.1
2,000,958	-				-1.4
2,000,958	-				-0.0
2,000,958	-				-0.5
2,000,958	-				-0.1
2,000,958	-				+0.0
2,000,958	-				-0.7
2,000,958	-				+0.7
2,000,958	-				+1.0
2,000,958	-				+0.5
2,000,958	-				-1.3
2,000,958	-				+0.0
2,000,968	+				-0.7
2,000,969	-				-0.3
2,000,969	-				-2.0
2,000,972	+				-0.5
2,001,161	-		Pf1N1B4_1749	0.61	-1.3
2,001,161	-		Pf1N1B4_1749	0.61	+0.7
2,001,161	-		Pf1N1B4_1749	0.61	-0.5
2,001,161	-				+2.0
2,001,257	-				+1.0
2,001,257	-				-0.1
2,001,257	-				+0.2
2,001,257	-				-0.5
2,001,257	-				+1.2
2,001,257	-				-0.4
2,001,258	+				-0.1
2,001,258	+				+1.0
2,001,258	+				+0.0
2,001,258	+				-0.3
2,001,258	+				+1.0
2,001,259	-				-0.4
2,001,259	-				-0.7
2,001,259	-				-0.7
2,001,272	+				-0.8
2,001,272	+				+1.0
2,001,273	-				-1.3
2,001,273	-				-0.5
2,001,273	-				+0.5
2,001,444	-		Pf1N1B4_1750	0.63	+2.0
2,001,516	+		Pf1N1B4_1750	0.89	-0.0
2,001,517	-				-1.4
2,001,517	-		Pf1N1B4_1750	0.89	+0.5
2,001,552	-				+0.7
2,001,720	+		Pf1N1B4_1751	0.69	-0.7
2,001,721	-		Pf1N1B4_1751	0.70	+2.0
2,001,817	+				+0.2
2,001,887	+				+0.2
2,001,888	-				-0.5
2,001,931	+				-0.1
2,001,931	+				+0.7
2,002,002	+		Pf1N1B4_1752	0.16	+0.5
2,002,003	-		Pf1N1B4_1752	0.16	-0.0
2,002,033	+		Pf1N1B4_1752	0.22	+0.0
2,002,033	+		Pf1N1B4_1752	0.22	-1.5
2,002,033	+		Pf1N1B4_1752	0.22	-1.9
2,002,033	+		Pf1N1B4_1752	0.22	-1.1
2,002,033	+		Pf1N1B4_1752	0.22	-1.5
2,002,033	+		Pf1N1B4_1752	0.22	-0.8
2,002,034	-		Pf1N1B4_1752	0.23	+1.4
2,002,034	-		Pf1N1B4_1752	0.23	+0.5
2,002,037	+		Pf1N1B4_1752	0.23	+1.0
2,002,037	+		Pf1N1B4_1752	0.23	-0.7
2,002,037	+		Pf1N1B4_1752	0.23	-0.6
2,002,038	-		Pf1N1B4_1752	0.23	-0.2
2,002,038	-		Pf1N1B4_1752	0.23	+2.0
2,002,040	-		Pf1N1B4_1752	0.24	+0.8
2,002,231	+		Pf1N1B4_1752	0.65	-1.5
2,002,231	+		Pf1N1B4_1752	0.65	-1.9
2,002,231	+		Pf1N1B4_1752	0.65	+0.5
2,002,231	+		Pf1N1B4_1752	0.65	-0.5
2,002,231	+				+1.5
2,002,231	+		Pf1N1B4_1752	0.65	-0.0
2,002,231	+		Pf1N1B4_1752	0.65	-1.1
2,002,232	-		Pf1N1B4_1752	0.65	-0.3
2,002,232	-		Pf1N1B4_1752	0.65	+0.0
2,002,232	-		Pf1N1B4_1752	0.65	+0.0
2,002,232	-		Pf1N1B4_1752	0.65	+3.0
2,002,345	+				-0.1
2,002,392	-				-0.3
2,002,456	+				-0.8
2,002,456	+				+0.5
2,002,457	-				+1.3
2,002,457	-				+0.9
2,002,464	+				-0.5
2,002,464	+				-1.6