Experiment: Paraquat dichloride 0.016 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_1413 and Pf1N1B4_1414 overlap by 1 nucleotides Pf1N1B4_1414 and Pf1N1B4_1415 overlap by 4 nucleotides
Pf1N1B4_1413 - tRNA dimethylallyltransferase (EC 2.5.1.75), at 1,621,055 to 1,622,026
_1413
Pf1N1B4_1414 - DNA mismatch repair protein MutL, at 1,622,026 to 1,623,936
_1414
Pf1N1B4_1415 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 1,623,933 to 1,625,348
_1415
Position (kb)
1622
1623
1624 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1622.250 kb on - strand, within Pf1N1B4_1414 at 1622.498 kb on + strand, within Pf1N1B4_1414 at 1622.499 kb on - strand, within Pf1N1B4_1414 at 1622.499 kb on - strand, within Pf1N1B4_1414 at 1622.499 kb on - strand, within Pf1N1B4_1414 at 1622.566 kb on - strand, within Pf1N1B4_1414 at 1622.566 kb on - strand, within Pf1N1B4_1414 at 1622.566 kb on - strand, within Pf1N1B4_1414 at 1622.567 kb on + strand, within Pf1N1B4_1414 at 1622.567 kb on + strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.568 kb on - strand, within Pf1N1B4_1414 at 1622.727 kb on - strand, within Pf1N1B4_1414 at 1622.733 kb on - strand, within Pf1N1B4_1414 at 1622.949 kb on - strand, within Pf1N1B4_1414 at 1622.986 kb on + strand, within Pf1N1B4_1414 at 1622.986 kb on + strand at 1622.987 kb on - strand, within Pf1N1B4_1414 at 1622.987 kb on - strand, within Pf1N1B4_1414 at 1622.987 kb on - strand at 1623.090 kb on - strand, within Pf1N1B4_1414 at 1623.153 kb on - strand, within Pf1N1B4_1414 at 1623.454 kb on - strand, within Pf1N1B4_1414 at 1623.454 kb on - strand, within Pf1N1B4_1414
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.016 mg/mL remove 1,622,250 - Pf1N1B4_1414 0.12 +0.9 1,622,498 + Pf1N1B4_1414 0.25 -0.4 1,622,499 - Pf1N1B4_1414 0.25 -0.5 1,622,499 - Pf1N1B4_1414 0.25 -1.3 1,622,499 - Pf1N1B4_1414 0.25 -0.2 1,622,566 - Pf1N1B4_1414 0.28 -0.6 1,622,566 - Pf1N1B4_1414 0.28 -0.4 1,622,566 - Pf1N1B4_1414 0.28 -0.4 1,622,567 + Pf1N1B4_1414 0.28 -0.8 1,622,567 + Pf1N1B4_1414 0.28 -1.4 1,622,568 - Pf1N1B4_1414 0.28 -0.5 1,622,568 - Pf1N1B4_1414 0.28 -1.0 1,622,568 - Pf1N1B4_1414 0.28 -1.7 1,622,568 - Pf1N1B4_1414 0.28 -0.6 1,622,568 - Pf1N1B4_1414 0.28 -1.1 1,622,568 - Pf1N1B4_1414 0.28 -1.1 1,622,568 - Pf1N1B4_1414 0.28 -0.6 1,622,568 - Pf1N1B4_1414 0.28 -0.1 1,622,568 - Pf1N1B4_1414 0.28 -1.1 1,622,568 - Pf1N1B4_1414 0.28 -1.6 1,622,568 - Pf1N1B4_1414 0.28 -0.7 1,622,568 - Pf1N1B4_1414 0.28 -0.2 1,622,568 - Pf1N1B4_1414 0.28 -1.0 1,622,568 - Pf1N1B4_1414 0.28 -0.5 1,622,727 - Pf1N1B4_1414 0.37 -1.1 1,622,733 - Pf1N1B4_1414 0.37 +0.9 1,622,949 - Pf1N1B4_1414 0.48 -1.2 1,622,986 + Pf1N1B4_1414 0.50 -0.9 1,622,986 + +2.5 1,622,987 - Pf1N1B4_1414 0.50 +0.6 1,622,987 - Pf1N1B4_1414 0.50 -0.1 1,622,987 - -0.7 1,623,090 - Pf1N1B4_1414 0.56 -2.2 1,623,153 - Pf1N1B4_1414 0.59 -0.6 1,623,454 - Pf1N1B4_1414 0.75 -1.8 1,623,454 - Pf1N1B4_1414 0.75 -0.5
Or see this region's nucleotide sequence