Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS00615

Experiment: Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE
116,307	-				+0.4
116,307	-				-0.5
116,318	-				+0.0
116,319	+				+0.4
116,322	-				-0.2
116,322	-				-1.0
116,323	+				+1.0
116,323	+				-1.3
116,323	+				+0.3
116,327	+				+0.6
116,327	+				+0.6
116,336	+				-2.4
116,336	+				+2.7
116,337	-				-1.5
116,372	+				+1.9
116,386	-				-0.2
116,386	-				-0.8
116,406	+				-0.6
116,406	+				+0.0
116,431	-		MMJJ_RS00610	0.12	-0.8
116,431	-		MMJJ_RS00610	0.12	+0.8
116,431	-		MMJJ_RS00610	0.12	-0.4
116,431	-		MMJJ_RS00610	0.12	+1.2
116,432	+		MMJJ_RS00610	0.12	+0.3
116,432	+		MMJJ_RS00610	0.12	-0.4
116,433	-		MMJJ_RS00610	0.12	-0.1
116,433	-		MMJJ_RS00610	0.12	+0.9
116,433	-		MMJJ_RS00610	0.12	+0.7
116,433	-		MMJJ_RS00610	0.12	+0.3
116,433	-		MMJJ_RS00610	0.12	-0.4
116,433	-		MMJJ_RS00610	0.12	-0.4
116,433	-		MMJJ_RS00610	0.12	-1.2
116,434	+		MMJJ_RS00610	0.12	+1.6
116,434	+		MMJJ_RS00610	0.12	-0.2
116,434	+		MMJJ_RS00610	0.12	-0.0
116,434	+		MMJJ_RS00610	0.12	-0.1
116,434	+		MMJJ_RS00610	0.12	+3.2
116,434	+		MMJJ_RS00610	0.12	+0.2
116,434	+		MMJJ_RS00610	0.12	-2.3
116,434	+		MMJJ_RS00610	0.12	+0.1
116,434	+		MMJJ_RS00610	0.12	+0.6
116,434	+		MMJJ_RS00610	0.12	-1.0
116,434	+		MMJJ_RS00610	0.12	-0.1
116,434	+		MMJJ_RS00610	0.12	-1.3
116,434	+		MMJJ_RS00610	0.12	-0.8
116,434	+		MMJJ_RS00610	0.12	-1.2
116,434	+		MMJJ_RS00610	0.12	-1.1
116,434	+		MMJJ_RS00610	0.12	-2.0
116,435	-		MMJJ_RS00610	0.12	-0.4
116,435	-		MMJJ_RS00610	0.12	-1.1
116,435	-		MMJJ_RS00610	0.12	+0.5
116,435	-		MMJJ_RS00610	0.12	+1.0
116,436	+		MMJJ_RS00610	0.12	-1.8
116,436	+		MMJJ_RS00610	0.12	-0.6
116,436	+		MMJJ_RS00610	0.12	-1.0
116,436	+		MMJJ_RS00610	0.12	-1.3
116,439	-		MMJJ_RS00610	0.13	+1.2
116,439	-		MMJJ_RS00610	0.13	+0.1
116,440	+		MMJJ_RS00610	0.13	-1.5
116,451	-		MMJJ_RS00610	0.14	-0.1
116,463	-		MMJJ_RS00610	0.15	+0.5
116,464	+		MMJJ_RS00610	0.15	+0.6
116,575	+		MMJJ_RS00610	0.27	-0.9
116,665	-		MMJJ_RS00610	0.36	-0.2
116,746	-		MMJJ_RS00610	0.45	-2.7
116,815	-		MMJJ_RS00610	0.52	+0.2
116,916	-		MMJJ_RS00610	0.63	+0.8
116,944	+		MMJJ_RS00610	0.66	+0.9
116,998	-		MMJJ_RS00610	0.71	-0.9
116,999	+		MMJJ_RS00610	0.71	-0.6
117,031	+		MMJJ_RS00610	0.75	+2.2
117,042	-		MMJJ_RS00610	0.76	-1.7
117,044	-		MMJJ_RS00610	0.76	-0.2
117,044	-		MMJJ_RS00610	0.76	+0.5
117,044	-		MMJJ_RS00610	0.76	-0.2
117,044	-		MMJJ_RS00610	0.76	-0.6
117,045	+		MMJJ_RS00610	0.76	+0.8
117,057	-		MMJJ_RS00610	0.78	-1.0
117,068	-		MMJJ_RS00610	0.79	-0.2
117,068	-		MMJJ_RS00610	0.79	+0.5
117,069	+		MMJJ_RS00610	0.79	-0.1
117,109	-		MMJJ_RS00610	0.83	-0.4
117,110	+		MMJJ_RS00610	0.83	+0.1
117,110	+		MMJJ_RS00610	0.83	-1.4
117,183	+				+0.1
117,183	+				-1.0
117,262	-				+0.3
117,293	-				+0.4
117,298	-				-0.3
117,299	+				+0.2
117,304	+				-0.7
117,313	-				+0.5
117,345	+				-1.5
117,455	-		MMJJ_RS00615	0.35	+0.0
117,456	+		MMJJ_RS00615	0.35	-0.8
117,480	+		MMJJ_RS00615	0.41	+2.7
117,480	+		MMJJ_RS00615	0.41	+1.2
117,522	-		MMJJ_RS00615	0.50	-2.3
117,523	+		MMJJ_RS00615	0.50	+2.0
117,523	+		MMJJ_RS00615	0.50	-0.9
117,626	+		MMJJ_RS00615	0.74	-0.4
117,655	+		MMJJ_RS00615	0.81	+1.2
117,659	-		MMJJ_RS00615	0.82	+0.0
117,692	+		MMJJ_RS00615	0.89	+1.0
117,698	-				-1.2
117,699	+				-0.9
117,758	+				-0.3
117,766	+				+0.4
117,784	-				-2.8
117,805	-				-0.7
117,805	-				+2.5
117,806	+				-0.9
117,806	+				-1.1
117,807	-				+0.3
117,807	-				-1.0
117,807	-				+1.1
117,808	+				+0.8
117,809	-				-1.5
117,809	-				-1.3
117,809	-				-0.8
117,809	-				-0.5
117,809	-				-0.6
117,809	-				-1.0
117,809	-				+1.2
117,809	-				+0.6
117,809	-				-2.2
117,809	-				-0.6
117,810	+				-0.8
117,810	+				-0.3
117,810	+				-0.1
117,810	+				+1.2
117,810	+				+0.2
117,810	+				+0.2
117,811	-				+1.7
117,811	-				+0.2
117,811	-				+0.0
117,811	-				+0.0
117,811	-				-1.2
117,811	-				+3.0
117,811	-				+1.2
117,811	-				-0.5
117,811	-				+0.6
117,812	+				-0.7
117,812	+				+3.4
117,813	-				+0.2
117,813	-				+2.4
117,813	-				-0.9
117,816	+				+0.4
117,816	+				-0.6
117,853	+				+0.7
117,858	-				-0.2
117,858	-				-1.1
117,940	+				+0.0
117,987	-				+0.5
117,987	-				-1.4
117,987	-				+3.0
117,988	+				+0.6
117,989	-				-0.5
117,989	-				-0.2
117,989	-				-0.3
117,989	-				-0.5
117,989	-				+2.9
117,990	+				-1.0
117,990	+				+0.5
117,990	+				-0.7
117,990	+				-0.5
117,990	+				+1.6
117,991	-				-0.8
117,991	-				+0.6
117,991	-				-0.2
117,991	-				-0.6
117,991	-				-0.1
117,991	-				-0.2
117,991	-				-1.6
117,992	+				+0.2
117,992	+				-1.1
117,992	+				+0.4
117,992	+				-1.2
117,992	+				+0.7
117,996	-		MMJJ_RS00620	0.10	+0.3
117,997	+		MMJJ_RS00620	0.10	+0.7
117,997	+		MMJJ_RS00620	0.10	+0.7
117,997	+		MMJJ_RS00620	0.10	-1.1
118,001	-		MMJJ_RS00620	0.11	-2.0
118,001	-		MMJJ_RS00620	0.11	+2.4
118,001	-		MMJJ_RS00620	0.11	+2.1
118,012	-		MMJJ_RS00620	0.11	+0.3
118,013	+		MMJJ_RS00620	0.12	-1.2
118,013	+		MMJJ_RS00620	0.12	-1.4
118,041	-		MMJJ_RS00620	0.14	-1.0
118,042	+		MMJJ_RS00620	0.14	-0.7
118,051	+		MMJJ_RS00620	0.15	+0.3
118,108	+		MMJJ_RS00620	0.19	+1.0
118,108	+		MMJJ_RS00620	0.19	+0.5
118,108	+		MMJJ_RS00620	0.19	-0.7
118,109	-		MMJJ_RS00620	0.19	-1.0
118,150	-		MMJJ_RS00620	0.22	+0.0
118,151	+		MMJJ_RS00620	0.22	+1.9
118,167	+		MMJJ_RS00620	0.24	-2.0
118,172	-		MMJJ_RS00620	0.24	-1.6
118,172	-		MMJJ_RS00620	0.24	+0.4
118,172	-		MMJJ_RS00620	0.24	-0.8
118,172	-		MMJJ_RS00620	0.24	+1.2
118,172	-		MMJJ_RS00620	0.24	-1.1
118,172	-		MMJJ_RS00620	0.24	-0.6
118,172	-		MMJJ_RS00620	0.24	-0.2
118,172	-		MMJJ_RS00620	0.24	-1.1
118,172	-		MMJJ_RS00620	0.24	+1.1
118,172	-		MMJJ_RS00620	0.24	-0.9
118,172	-		MMJJ_RS00620	0.24	+3.1
118,173	+		MMJJ_RS00620	0.24	-0.7
118,173	+		MMJJ_RS00620	0.24	-0.4
118,173	+		MMJJ_RS00620	0.24	-0.5
118,173	+		MMJJ_RS00620	0.24	-1.0
118,173	+		MMJJ_RS00620	0.24	+0.2
118,173	+		MMJJ_RS00620	0.24	-0.8
118,173	+		MMJJ_RS00620	0.24	-0.5
118,173	+		MMJJ_RS00620	0.24	-0.7
118,173	+		MMJJ_RS00620	0.24	-2.2
118,176	-		MMJJ_RS00620	0.24	-0.7
118,177	+		MMJJ_RS00620	0.24	+0.7
118,182	-		MMJJ_RS00620	0.25	-0.4
118,182	-		MMJJ_RS00620	0.25	-0.1
118,183	+		MMJJ_RS00620	0.25	+1.5
118,183	+		MMJJ_RS00620	0.25	+1.5
118,183	+		MMJJ_RS00620	0.25	+1.1
118,184	-		MMJJ_RS00620	0.25	+0.7
118,184	-		MMJJ_RS00620	0.25	-0.2
118,184	-		MMJJ_RS00620	0.25	-0.9
118,184	-		MMJJ_RS00620	0.25	-0.1
118,185	+		MMJJ_RS00620	0.25	+0.2
118,185	+		MMJJ_RS00620	0.25	+0.3
118,185	+		MMJJ_RS00620	0.25	+2.2
118,185	+		MMJJ_RS00620	0.25	+1.2
118,185	+		MMJJ_RS00620	0.25	+2.0
118,185	+		MMJJ_RS00620	0.25	+2.4
118,185	+		MMJJ_RS00620	0.25	+0.3
118,192	-		MMJJ_RS00620	0.26	+0.8
118,192	-		MMJJ_RS00620	0.26	+0.3
118,193	+		MMJJ_RS00620	0.26	+0.4
118,217	-		MMJJ_RS00620	0.27	-2.1
118,241	-		MMJJ_RS00620	0.29	-0.8
118,245	-		MMJJ_RS00620	0.30	+0.7
118,246	+		MMJJ_RS00620	0.30	-0.5
118,276	-		MMJJ_RS00620	0.32	-0.5
118,277	+		MMJJ_RS00620	0.32	-0.6
118,317	-		MMJJ_RS00620	0.35	+0.5
118,318	+		MMJJ_RS00620	0.35	-1.4
118,318	+		MMJJ_RS00620	0.35	-0.1
118,378	+		MMJJ_RS00620	0.40	-1.1
118,381	-		MMJJ_RS00620	0.40	+1.0
118,382	+		MMJJ_RS00620	0.40	+1.3
118,385	-		MMJJ_RS00620	0.41	+2.8
118,386	+		MMJJ_RS00620	0.41	-0.6
118,457	-		MMJJ_RS00620	0.46	+1.4
118,458	+		MMJJ_RS00620	0.46	-0.5
118,460	+		MMJJ_RS00620	0.46	-0.2
118,460	+		MMJJ_RS00620	0.46	-0.4
118,553	-		MMJJ_RS00620	0.54	-1.5
118,555	-		MMJJ_RS00620	0.54	+0.6
118,640	-		MMJJ_RS00620	0.60	-1.0
118,662	+		MMJJ_RS00620	0.62	-1.5
118,667	+		MMJJ_RS00620	0.63	-0.0
118,699	+		MMJJ_RS00620	0.65	-0.5
118,699	+		MMJJ_RS00620	0.65	-0.4
118,699	+		MMJJ_RS00620	0.65	-0.3
118,699	+		MMJJ_RS00620	0.65	+2.1
118,699	+		MMJJ_RS00620	0.65	-0.3
118,699	+		MMJJ_RS00620	0.65	+0.5
118,722	-		MMJJ_RS00620	0.67	+0.5
118,722	-		MMJJ_RS00620	0.67	+2.3
118,723	+		MMJJ_RS00620	0.67	+0.2