Experiment: sodium fluoride 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07770 and AO356_07775 are separated by 67 nucleotides AO356_07775 and AO356_07780 are separated by 123 nucleotides AO356_07780 and AO356_07785 are separated by 1 nucleotides AO356_07785 and AO356_07790 are separated by 27 nucleotides
AO356_07770: AO356_07770 - toxin, at 1,735,160 to 1,737,958
_07770
AO356_07775: AO356_07775 - glyoxalase, at 1,738,026 to 1,738,394
_07775
AO356_07780: AO356_07780 - D-aminoacylase, at 1,738,518 to 1,739,990
_07780
AO356_07785: AO356_07785 - RpiR family transcriptional regulator, at 1,739,992 to 1,740,852
_07785
AO356_07790: AO356_07790 - permease DsdX, at 1,740,880 to 1,742,229
_07790
Position (kb)
1738
1739
1740 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1737.539 kb on - strand, within AO356_07770 at 1737.539 kb on - strand, within AO356_07770 at 1737.564 kb on + strand, within AO356_07770 at 1737.564 kb on + strand, within AO356_07770 at 1737.564 kb on + strand, within AO356_07770 at 1737.564 kb on + strand, within AO356_07770 at 1737.564 kb on + strand, within AO356_07770 at 1737.565 kb on - strand, within AO356_07770 at 1737.620 kb on + strand, within AO356_07770 at 1737.620 kb on + strand, within AO356_07770 at 1737.620 kb on + strand, within AO356_07770 at 1737.621 kb on - strand, within AO356_07770 at 1737.621 kb on - strand, within AO356_07770 at 1737.621 kb on - strand, within AO356_07770 at 1737.621 kb on - strand, within AO356_07770 at 1737.621 kb on - strand, within AO356_07770 at 1737.661 kb on + strand, within AO356_07770 at 1737.662 kb on - strand, within AO356_07770 at 1737.662 kb on - strand, within AO356_07770 at 1737.662 kb on - strand, within AO356_07770 at 1737.902 kb on + strand at 1737.902 kb on + strand at 1737.903 kb on - strand at 1737.903 kb on - strand at 1737.903 kb on - strand at 1737.903 kb on - strand at 1737.903 kb on - strand at 1737.903 kb on - strand at 1737.922 kb on + strand at 1738.046 kb on + strand at 1738.047 kb on - strand at 1738.047 kb on - strand at 1738.267 kb on + strand, within AO356_07775 at 1738.268 kb on - strand, within AO356_07775 at 1738.268 kb on - strand, within AO356_07775 at 1738.330 kb on + strand, within AO356_07775 at 1738.330 kb on + strand, within AO356_07775 at 1738.330 kb on + strand, within AO356_07775 at 1738.330 kb on + strand, within AO356_07775 at 1738.331 kb on - strand, within AO356_07775 at 1738.331 kb on - strand, within AO356_07775 at 1738.425 kb on + strand at 1738.468 kb on + strand at 1738.501 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.508 kb on + strand at 1738.509 kb on - strand at 1738.509 kb on - strand at 1738.509 kb on - strand at 1738.943 kb on + strand, within AO356_07780 at 1738.944 kb on - strand, within AO356_07780 at 1738.969 kb on + strand, within AO356_07780 at 1738.972 kb on + strand, within AO356_07780 at 1738.972 kb on + strand, within AO356_07780 at 1738.973 kb on - strand, within AO356_07780 at 1738.973 kb on - strand, within AO356_07780 at 1738.973 kb on - strand, within AO356_07780 at 1739.231 kb on + strand, within AO356_07780 at 1739.353 kb on + strand, within AO356_07780 at 1739.353 kb on + strand, within AO356_07780 at 1739.353 kb on + strand, within AO356_07780 at 1739.354 kb on - strand, within AO356_07780 at 1739.428 kb on + strand, within AO356_07780 at 1739.429 kb on - strand, within AO356_07780 at 1739.537 kb on + strand, within AO356_07780 at 1739.537 kb on + strand, within AO356_07780 at 1739.537 kb on + strand, within AO356_07780 at 1739.537 kb on + strand, within AO356_07780 at 1739.538 kb on - strand, within AO356_07780 at 1739.538 kb on - strand, within AO356_07780 at 1739.538 kb on - strand, within AO356_07780 at 1739.594 kb on + strand, within AO356_07780 at 1739.972 kb on + strand at 1739.973 kb on - strand at 1739.973 kb on - strand at 1739.984 kb on - strand at 1739.984 kb on - strand at 1739.984 kb on - strand at 1740.155 kb on + strand, within AO356_07785 at 1740.155 kb on + strand, within AO356_07785 at 1740.156 kb on - strand, within AO356_07785 at 1740.156 kb on - strand, within AO356_07785 at 1740.156 kb on - strand, within AO356_07785 at 1740.575 kb on + strand, within AO356_07785 at 1740.575 kb on + strand, within AO356_07785 at 1740.575 kb on + strand, within AO356_07785 at 1740.575 kb on + strand, within AO356_07785 at 1740.839 kb on + strand at 1740.978 kb on + strand at 1740.979 kb on - strand at 1740.987 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 6.25 mM remove 1,737,539 - AO356_07770 0.85 +0.8 1,737,539 - AO356_07770 0.85 +0.8 1,737,564 + AO356_07770 0.86 -1.6 1,737,564 + AO356_07770 0.86 -0.2 1,737,564 + AO356_07770 0.86 -0.3 1,737,564 + AO356_07770 0.86 +0.6 1,737,564 + AO356_07770 0.86 +0.7 1,737,565 - AO356_07770 0.86 -0.1 1,737,620 + AO356_07770 0.88 +0.3 1,737,620 + AO356_07770 0.88 -1.2 1,737,620 + AO356_07770 0.88 +0.2 1,737,621 - AO356_07770 0.88 -0.4 1,737,621 - AO356_07770 0.88 -0.8 1,737,621 - AO356_07770 0.88 -0.3 1,737,621 - AO356_07770 0.88 +0.5 1,737,621 - AO356_07770 0.88 -0.6 1,737,661 + AO356_07770 0.89 +0.0 1,737,662 - AO356_07770 0.89 -0.2 1,737,662 - AO356_07770 0.89 -0.5 1,737,662 - AO356_07770 0.89 +0.7 1,737,902 + -0.2 1,737,902 + +0.6 1,737,903 - -0.3 1,737,903 - -0.3 1,737,903 - +0.9 1,737,903 - +0.7 1,737,903 - -0.5 1,737,903 - -0.1 1,737,922 + -1.3 1,738,046 + -0.3 1,738,047 - +0.1 1,738,047 - +0.9 1,738,267 + AO356_07775 0.65 -0.2 1,738,268 - AO356_07775 0.66 +1.0 1,738,268 - AO356_07775 0.66 +0.2 1,738,330 + AO356_07775 0.82 -1.8 1,738,330 + AO356_07775 0.82 -0.3 1,738,330 + AO356_07775 0.82 +0.2 1,738,330 + AO356_07775 0.82 -1.4 1,738,331 - AO356_07775 0.83 -1.4 1,738,331 - AO356_07775 0.83 -1.4 1,738,425 + -0.6 1,738,468 + -0.0 1,738,501 + +0.2 1,738,508 + -0.3 1,738,508 + -0.1 1,738,508 + +0.6 1,738,508 + -0.1 1,738,508 + +0.3 1,738,508 + -0.3 1,738,508 + -3.3 1,738,508 + +0.2 1,738,509 - -1.4 1,738,509 - +1.8 1,738,509 - -0.8 1,738,943 + AO356_07780 0.29 +0.7 1,738,944 - AO356_07780 0.29 +0.2 1,738,969 + AO356_07780 0.31 +1.0 1,738,972 + AO356_07780 0.31 +1.4 1,738,972 + AO356_07780 0.31 -0.2 1,738,973 - AO356_07780 0.31 -0.3 1,738,973 - AO356_07780 0.31 +0.1 1,738,973 - AO356_07780 0.31 +0.7 1,739,231 + AO356_07780 0.48 -1.2 1,739,353 + AO356_07780 0.57 -0.1 1,739,353 + AO356_07780 0.57 +0.6 1,739,353 + AO356_07780 0.57 +0.4 1,739,354 - AO356_07780 0.57 -0.6 1,739,428 + AO356_07780 0.62 -0.4 1,739,429 - AO356_07780 0.62 -0.7 1,739,537 + AO356_07780 0.69 -0.3 1,739,537 + AO356_07780 0.69 -0.7 1,739,537 + AO356_07780 0.69 -1.0 1,739,537 + AO356_07780 0.69 +0.1 1,739,538 - AO356_07780 0.69 -1.3 1,739,538 - AO356_07780 0.69 +0.4 1,739,538 - AO356_07780 0.69 -0.1 1,739,594 + AO356_07780 0.73 +0.5 1,739,972 + -0.1 1,739,973 - -0.1 1,739,973 - +0.4 1,739,984 - -0.5 1,739,984 - +1.8 1,739,984 - -0.3 1,740,155 + AO356_07785 0.19 +0.3 1,740,155 + AO356_07785 0.19 -0.5 1,740,156 - AO356_07785 0.19 +0.5 1,740,156 - AO356_07785 0.19 +0.1 1,740,156 - AO356_07785 0.19 +0.1 1,740,575 + AO356_07785 0.68 -0.2 1,740,575 + AO356_07785 0.68 +0.3 1,740,575 + AO356_07785 0.68 +1.2 1,740,575 + AO356_07785 0.68 +0.2 1,740,839 + +0.1 1,740,978 + -0.5 1,740,979 - +0.6 1,740,987 - -0.5
Or see this region's nucleotide sequence