Strain Fitness in Sinorhizobium meliloti 1021 around SMc04289

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,208,150	+		SMc04283	0.86	-0.6
2,208,150	+		SMc04283	0.86	+0.4
2,208,150	+		SMc04283	0.86	+0.6
2,208,207	+		SMc04283	0.90	-1.0
2,208,267	+				-2.4
2,208,267	+				-1.5
2,208,268	-				-0.3
2,208,268	-				-0.2
2,208,268	-				-0.2
2,208,268	-				-0.3
2,208,276	+				-1.0
2,208,531	+		SMc04287	0.21	-1.5
2,208,532	-		SMc04287	0.21	-0.6
2,208,641	+		SMc04287	0.36	+0.5
2,208,641	+		SMc04287	0.36	-1.3
2,208,642	-		SMc04287	0.37	+0.3
2,208,645	-		SMc04287	0.37	-0.4
2,208,645	-		SMc04287	0.37	-0.7
2,208,708	-		SMc04287	0.46	-0.5
2,208,713	+		SMc04287	0.47	-0.1
2,208,722	+		SMc04287	0.48	-0.8
2,208,722	+		SMc04287	0.48	-0.4
2,208,722	+		SMc04287	0.48	-0.2
2,208,722	+		SMc04287	0.48	+0.0
2,208,762	-		SMc04287	0.54	+0.7
2,208,762	-		SMc04287	0.54	-0.1
2,208,762	-				+2.1
2,208,882	-		SMc04287	0.71	+0.7
2,208,882	-		SMc04287	0.71	-0.7
2,208,932	+		SMc04287	0.78	-0.2
2,208,932	+		SMc04287	0.78	-0.0
2,208,933	-		SMc04287	0.78	-0.9
2,209,299	+		SMc04289	0.15	+0.2
2,209,300	-		SMc04289	0.15	-0.1
2,209,300	-		SMc04289	0.15	+1.9
2,209,341	+		SMc04289	0.19	-0.6
2,209,390	-		SMc04289	0.23	+0.2
2,209,445	+		SMc04289	0.28	-0.5
2,209,446	-		SMc04289	0.28	-0.7
2,209,527	+		SMc04289	0.35	-0.3
2,209,528	-		SMc04289	0.35	-0.8
2,209,528	-		SMc04289	0.35	+0.0
2,209,594	+		SMc04289	0.41	-0.1
2,209,700	-		SMc04289	0.50	-1.7
2,209,717	+		SMc04289	0.52	+0.3
2,209,792	-		SMc04289	0.58	-0.1
2,209,861	-		SMc04289	0.64	+0.3
2,209,861	-		SMc04289	0.64	+0.3
2,209,945	-		SMc04289	0.72	-0.9
2,209,945	-		SMc04289	0.72	-0.7
2,209,950	+		SMc04289	0.72	+0.2
2,209,951	-		SMc04289	0.72	-1.1
2,209,951	-		SMc04289	0.72	-1.0
2,209,951	-		SMc04289	0.72	+0.2
2,209,951	-		SMc04289	0.72	+0.2
2,210,173	+				+1.1
2,210,173	+				-0.5
2,210,174	-				-0.7
2,210,174	-				-0.2
2,210,406	+				+0.9
2,210,406	+				+1.1
2,210,406	+				-0.3
2,210,407	-				-0.8
2,210,407	-				-0.9
2,210,482	-				-0.5
2,210,482	-				-0.5
2,210,482	-				-0.3
2,210,482	-				-0.1
2,210,484	+				-0.9
2,210,484	+				+0.3
2,210,485	-				+0.4
2,210,485	-				+0.5
2,210,485	-				-0.7
2,210,485	-				+0.6
2,210,538	+				+1.7
2,210,538	+				-0.9
2,210,539	-				+0.9
2,210,548	+				-0.0
2,210,549	-				+0.4
2,210,593	+				+0.2
2,210,594	-				+0.3
2,210,636	-				+0.4
2,210,983	+		SMc04291	0.33	+2.3
2,211,059	+		SMc04291	0.39	+1.2
2,211,059	+		SMc04291	0.39	+0.4
2,211,212	+		SMc04291	0.50	-1.6
2,211,212	+		SMc04291	0.50	-1.0
2,211,212	+		SMc04291	0.50	+0.6
2,211,213	-		SMc04291	0.50	-0.6
2,211,213	-		SMc04291	0.50	+0.3
2,211,213	-		SMc04291	0.50	+0.1
2,211,213	-		SMc04291	0.50	+0.3
2,211,213	-		SMc04291	0.50	+0.1