Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03018 and SMc03019 are separated by 211 nucleotides SMc03019 and SMc03020 are separated by 87 nucleotides SMc03020 and SMc03021 are separated by 19 nucleotides
SMc03018: SMc03018 - flagellar biosynthesis protein FlhB, at 716,030 to 717,112
SMc03018
SMc03019: SMc03019 - flagellar motor switch protein G, at 717,324 to 718,361
SMc03019
SMc03020: SMc03020 - flagellar motor switch protein, at 718,449 to 719,081
SMc03020
SMc03021: SMc03021 - flagellar motor switch transmembrane protein, at 719,101 to 720,048
SMc03021
Position (kb) 717
718
719 Strain fitness (log2 ratio) -2
-1
0
1 at 716.457 kb on + strand, within SMc03018 at 716.458 kb on - strand, within SMc03018 at 716.604 kb on + strand, within SMc03018 at 716.649 kb on - strand, within SMc03018 at 716.694 kb on + strand, within SMc03018 at 716.695 kb on - strand, within SMc03018 at 716.695 kb on - strand, within SMc03018 at 716.887 kb on + strand, within SMc03018 at 717.085 kb on + strand at 717.303 kb on + strand at 717.303 kb on + strand at 717.304 kb on - strand at 717.305 kb on + strand at 717.306 kb on - strand at 717.624 kb on + strand, within SMc03019 at 717.625 kb on - strand, within SMc03019 at 717.625 kb on - strand, within SMc03019 at 717.625 kb on - strand, within SMc03019 at 717.925 kb on + strand, within SMc03019 at 717.926 kb on - strand, within SMc03019 at 718.450 kb on + strand at 719.165 kb on + strand at 719.166 kb on - strand at 719.198 kb on + strand, within SMc03021 at 719.199 kb on - strand, within SMc03021 at 719.199 kb on - strand, within SMc03021
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 716,457 + SMc03018 0.39 +0.2 716,458 - SMc03018 0.40 -1.5 716,604 + SMc03018 0.53 -0.2 716,649 - SMc03018 0.57 +0.3 716,694 + SMc03018 0.61 -0.3 716,695 - SMc03018 0.61 -0.6 716,695 - SMc03018 0.61 -2.4 716,887 + SMc03018 0.79 +0.0 717,085 + -0.4 717,303 + +0.7 717,303 + -0.1 717,304 - +1.3 717,305 + -0.3 717,306 - -0.2 717,624 + SMc03019 0.29 +1.2 717,625 - SMc03019 0.29 +0.8 717,625 - SMc03019 0.29 +0.3 717,625 - SMc03019 0.29 +0.1 717,925 + SMc03019 0.58 -0.2 717,926 - SMc03019 0.58 +0.5 718,450 + -0.1 719,165 + +0.3 719,166 - -0.2 719,198 + SMc03021 0.10 -0.1 719,199 - SMc03021 0.10 -0.5 719,199 - SMc03021 0.10 +1.2
Or see this region's nucleotide sequence