Strain Fitness in Sinorhizobium meliloti 1021 around SMc02729

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,580,345	+		SMc02728	0.47	+0.1
2,580,345	+		SMc02728	0.47	-0.5
2,580,352	+		SMc02728	0.47	-2.0
2,580,353	-		SMc02728	0.47	-0.4
2,580,353	-		SMc02728	0.47	-1.6
2,580,353	-		SMc02728	0.47	-0.0
2,580,353	-		SMc02728	0.47	-1.0
2,580,353	-		SMc02728	0.47	-0.6
2,580,496	-		SMc02728	0.56	-1.2
2,580,605	+		SMc02728	0.62	+0.7
2,580,788	-		SMc02728	0.73	-0.6
2,580,788	-		SMc02728	0.73	-1.6
2,580,788	-		SMc02728	0.73	+0.2
2,580,791	+		SMc02728	0.73	-0.3
2,580,791	+		SMc02728	0.73	-0.6
2,580,791	+		SMc02728	0.73	+0.0
2,580,791	+		SMc02728	0.73	-0.6
2,580,792	-		SMc02728	0.73	+0.1
2,580,821	+		SMc02728	0.75	+0.2
2,580,923	+		SMc02728	0.81	-1.2
2,581,230	+				-0.6
2,581,230	+				-1.6
2,581,230	+				+1.1
2,581,231	-				-0.1
2,581,314	-				-0.1
2,581,387	+				-1.0
2,581,387	+				-1.2
2,581,387	+				-0.8
2,581,387	+				-0.9
2,581,387	+				+0.7
2,581,387	+				-1.0
2,581,387	+				+0.5
2,581,388	-				-0.3
2,581,388	-				-1.0
2,581,388	-				+0.1
2,581,501	+		SMc02729	0.14	+1.8
2,581,502	-		SMc02729	0.14	-0.9
2,581,502	-		SMc02729	0.14	-1.0
2,581,570	+		SMc02729	0.19	+0.1
2,581,574	-		SMc02729	0.20	-1.0
2,581,579	+		SMc02729	0.20	-0.5
2,581,579	+		SMc02729	0.20	-0.3
2,581,580	-		SMc02729	0.20	-1.6
2,581,580	-		SMc02729	0.20	-0.4
2,581,791	-		SMc02729	0.38	-0.5
2,581,791	-		SMc02729	0.38	-1.3
2,581,802	-		SMc02729	0.38	-0.7
2,582,054	-		SMc02729	0.59	-0.5
2,582,187	-		SMc02729	0.70	-0.3
2,582,326	+		SMc02729	0.81	-0.1
2,582,326	+		SMc02729	0.81	+1.1
2,582,327	-		SMc02729	0.81	+0.2
2,582,371	+		SMc02729	0.85	-0.6
2,582,374	-		SMc02729	0.85	-0.5
2,582,377	+		SMc02729	0.85	-3.0
2,582,378	-		SMc02729	0.85	-0.8
2,582,378	-		SMc02729	0.85	-0.4
2,582,378	-		SMc02729	0.85	-1.1
2,582,520	+				+0.0
2,582,520	+				-0.0
2,582,560	+				-0.2
2,582,561	-				+0.1
2,582,614	+				+0.4
2,582,614	+				-1.0
2,582,615	-				-0.1
2,582,615	-				+0.3
2,582,615	-				+0.2
2,582,642	-				+0.3
2,582,642	-				-1.2
2,582,662	+				+0.0
2,582,671	+				+0.1
2,582,671	+				-0.8
2,582,671	+				-0.5
2,582,672	-				-1.2
2,582,672	-				-0.0
2,582,680	+				-1.0
2,582,878	+		SMc02730	0.25	-0.4
2,583,085	+		SMc02730	0.41	-0.4
2,583,085	+		SMc02730	0.41	-1.0
2,583,086	-		SMc02730	0.41	-1.5
2,583,115	+		SMc02730	0.43	-0.1
2,583,115	+		SMc02730	0.43	-0.6
2,583,115	+		SMc02730	0.43	-2.5
2,583,115	+		SMc02730	0.43	-0.5
2,583,115	+		SMc02730	0.43	+0.3
2,583,116	-		SMc02730	0.43	-2.4
2,583,279	+		SMc02730	0.56	-0.2
2,583,280	-		SMc02730	0.56	+1.0