Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02138 and SMc02137 are separated by 74 nucleotides SMc02137 and SMc02136 are separated by 366 nucleotides
SMc02138: SMc02138 - acetylornithine transaminase, at 574,093 to 575,292
SMc02138
SMc02137: SMc02137 - ornithine carbamoyltransferase, at 575,367 to 576,278
SMc02137
SMc02136: SMc02136 - Hsp33-like chaperonin, at 576,645 to 577,637
SMc02136
Position (kb) 575
576
577 Strain fitness (log2 ratio) -1
0
1
2 at 574.427 kb on - strand, within SMc02138 at 574.427 kb on - strand, within SMc02138 at 574.531 kb on + strand, within SMc02138 at 574.531 kb on + strand, within SMc02138 at 574.532 kb on - strand, within SMc02138 at 574.568 kb on - strand, within SMc02138 at 574.757 kb on + strand, within SMc02138 at 574.758 kb on - strand, within SMc02138 at 574.810 kb on - strand, within SMc02138 at 574.916 kb on - strand, within SMc02138 at 575.366 kb on + strand at 575.366 kb on + strand at 575.366 kb on + strand at 575.366 kb on + strand at 575.367 kb on - strand at 575.367 kb on - strand at 575.367 kb on - strand at 575.653 kb on - strand, within SMc02137 at 575.663 kb on + strand, within SMc02137 at 575.663 kb on + strand, within SMc02137 at 575.750 kb on + strand, within SMc02137 at 575.751 kb on - strand, within SMc02137 at 576.334 kb on + strand at 576.334 kb on + strand at 576.790 kb on - strand, within SMc02136 at 576.790 kb on - strand, within SMc02136 at 576.960 kb on + strand, within SMc02136 at 576.965 kb on + strand, within SMc02136 at 576.965 kb on + strand, within SMc02136
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 574,427 - SMc02138 0.28 +0.1 574,427 - SMc02138 0.28 +1.1 574,531 + SMc02138 0.36 -1.1 574,531 + SMc02138 0.36 -0.9 574,532 - SMc02138 0.37 +1.2 574,568 - SMc02138 0.40 +0.2 574,757 + SMc02138 0.55 -1.1 574,758 - SMc02138 0.55 +0.3 574,810 - SMc02138 0.60 +0.1 574,916 - SMc02138 0.69 -0.1 575,366 + +2.0 575,366 + +0.3 575,366 + +0.7 575,366 + +0.2 575,367 - +0.7 575,367 - +0.7 575,367 - +0.9 575,653 - SMc02137 0.31 +1.4 575,663 + SMc02137 0.32 +1.6 575,663 + SMc02137 0.32 +1.9 575,750 + SMc02137 0.42 +1.2 575,751 - SMc02137 0.42 +0.6 576,334 + +0.9 576,334 + +0.9 576,790 - SMc02136 0.15 -0.0 576,790 - SMc02136 0.15 +0.8 576,960 + SMc02136 0.32 -0.2 576,965 + SMc02136 0.32 +0.8 576,965 + SMc02136 0.32 +0.0
Or see this region's nucleotide sequence