Strain Fitness in Sinorhizobium meliloti 1021 around SMa1998

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,131,425	+				+0.4
1,131,425	+				+0.2
1,131,704	+		SMa1996	0.30	-0.9
1,131,720	+		SMa1996	0.31	-0.7
1,131,720	+		SMa1996	0.31	-2.0
1,131,721	-		SMa1996	0.31	-0.0
1,131,721	-		SMa1996	0.31	+0.4
1,131,822	+		SMa1996	0.42	-1.2
1,131,835	-		SMa1996	0.43	+0.2
1,131,839	+		SMa1996	0.44	+0.0
1,131,840	-		SMa1996	0.44	-1.1
1,131,987	+		SMa1996	0.59	-0.6
1,131,988	-		SMa1996	0.59	+0.2
1,131,988	-		SMa1996	0.59	-0.3
1,131,988	-		SMa1996	0.59	-0.0
1,132,042	-		SMa1996	0.64	-0.0
1,132,132	+		SMa1996	0.74	-0.4
1,132,479	-				+0.1
1,132,492	+				-2.0
1,132,492	+				-0.4
1,132,493	-				-0.2
1,132,493	-				-0.3
1,132,580	+		SMa1998	0.12	+0.3
1,132,580	+		SMa1998	0.12	-0.6
1,132,950	-		SMa1998	0.37	-1.6
1,133,312	-		SMa1998	0.61	-0.7
1,133,312	-		SMa1998	0.61	-0.0
1,133,535	-		SMa1998	0.76	-0.1
1,133,656	-		SMa1998	0.84	-0.0
1,133,695	-		SMa1998	0.86	-0.7
1,133,960	-				-1.2
1,134,043	+				-0.0
1,134,082	+		SMa2000	0.12	+1.6
1,134,083	-		SMa2000	0.12	-1.2
1,134,089	-		SMa2000	0.12	+1.3
1,134,089	-		SMa2000	0.12	+0.4
1,134,370	+		SMa2000	0.38	-0.1
1,134,371	-		SMa2000	0.38	-0.2
1,134,371	-		SMa2000	0.38	+2.4
1,134,452	+		SMa2000	0.46	+0.5
1,134,453	-		SMa2000	0.46	-0.2
1,134,453	-		SMa2000	0.46	-0.2
1,134,575	+		SMa2000	0.57	+0.4
1,134,576	-		SMa2000	0.57	+0.5
1,134,576	-		SMa2000	0.57	-0.5
1,134,577	+		SMa2000	0.57	+0.7
1,134,578	-		SMa2000	0.58	-0.3
1,134,578	-		SMa2000	0.58	-0.1
1,134,791	-		SMa2000	0.77	+0.2
1,134,833	+		SMa2000	0.81	+0.1
1,134,889	+		SMa2000	0.86	-0.5