Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0939 and SMa0940 are separated by 4 nucleotides SMa0940 and SMa0941 are separated by 120 nucleotides SMa0941 and SMa0943 are separated by 231 nucleotides
SMa0939: SMa0939 - sensor histidine kinase of two-component system, at 523,213 to 525,114
SMa0939
SMa0940: SMa0940 - Response regulator, at 525,119 to 525,733
SMa0940
SMa0941: SMa0941 - hypothetical protein, at 525,854 to 526,237
SMa0941
SMa0943: SMa0943 - arylsulfatase, at 526,469 to 528,106
SMa0943
Position (kb) 525
526
527 Strain fitness (log2 ratio) -1
0
1
2 at 525.213 kb on - strand, within SMa0940 at 525.213 kb on - strand, within SMa0940 at 525.380 kb on - strand, within SMa0940 at 525.521 kb on - strand, within SMa0940 at 525.521 kb on - strand, within SMa0940 at 525.521 kb on - strand, within SMa0940 at 525.613 kb on + strand, within SMa0940 at 525.614 kb on - strand, within SMa0940 at 525.776 kb on - strand at 525.850 kb on + strand at 525.850 kb on + strand at 525.916 kb on - strand, within SMa0941 at 525.916 kb on - strand, within SMa0941 at 525.956 kb on + strand, within SMa0941 at 525.957 kb on - strand, within SMa0941 at 525.989 kb on - strand, within SMa0941 at 526.109 kb on - strand, within SMa0941 at 526.285 kb on + strand at 526.286 kb on - strand at 526.286 kb on - strand at 526.303 kb on + strand at 526.477 kb on + strand at 526.477 kb on + strand at 526.477 kb on + strand at 526.612 kb on + strand at 526.614 kb on + strand at 526.614 kb on + strand at 526.614 kb on + strand at 526.615 kb on - strand at 526.661 kb on + strand, within SMa0943 at 526.737 kb on + strand, within SMa0943 at 526.738 kb on - strand, within SMa0943 at 526.739 kb on + strand, within SMa0943 at 526.739 kb on + strand, within SMa0943 at 526.740 kb on - strand, within SMa0943 at 526.867 kb on - strand, within SMa0943 at 526.937 kb on + strand, within SMa0943 at 526.987 kb on - strand, within SMa0943 at 527.074 kb on + strand at 527.074 kb on + strand, within SMa0943 at 527.075 kb on - strand, within SMa0943 at 527.130 kb on + strand, within SMa0943 at 527.131 kb on - strand, within SMa0943 at 527.131 kb on - strand, within SMa0943
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 525,213 - SMa0940 0.15 -0.3 525,213 - SMa0940 0.15 -0.2 525,380 - SMa0940 0.42 +0.3 525,521 - SMa0940 0.65 +0.5 525,521 - SMa0940 0.65 +2.1 525,521 - SMa0940 0.65 -1.0 525,613 + SMa0940 0.80 +1.3 525,614 - SMa0940 0.80 -0.6 525,776 - +0.6 525,850 + -0.3 525,850 + -1.4 525,916 - SMa0941 0.16 -1.3 525,916 - SMa0941 0.16 -0.0 525,956 + SMa0941 0.27 +0.2 525,957 - SMa0941 0.27 -0.7 525,989 - SMa0941 0.35 -0.4 526,109 - SMa0941 0.66 -0.0 526,285 + -0.8 526,286 - +1.0 526,286 - +0.4 526,303 + +0.6 526,477 + +0.3 526,477 + -1.0 526,477 + +0.6 526,612 + -0.0 526,614 + -0.7 526,614 + -0.2 526,614 + +1.2 526,615 - +0.0 526,661 + SMa0943 0.12 +0.9 526,737 + SMa0943 0.16 -0.5 526,738 - SMa0943 0.16 +0.5 526,739 + SMa0943 0.16 +0.2 526,739 + SMa0943 0.16 -0.4 526,740 - SMa0943 0.17 -0.1 526,867 - SMa0943 0.24 +0.4 526,937 + SMa0943 0.29 +0.1 526,987 - SMa0943 0.32 -0.6 527,074 + -1.0 527,074 + SMa0943 0.37 +1.3 527,075 - SMa0943 0.37 +0.8 527,130 + SMa0943 0.40 -0.1 527,131 - SMa0943 0.40 -0.2 527,131 - SMa0943 0.40 -0.5
Or see this region's nucleotide sequence