Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21343 and SM_b21344 are separated by 1 nucleotides SM_b21344 and SM_b21345 are separated by 99 nucleotides
SM_b21343: SM_b21343 - sugar uptake ABC transporter permease, at 1,008,768 to 1,009,772
_b21343
SM_b21344: SM_b21344 - sugar uptake ABC transporter ATP-binding protein, at 1,009,774 to 1,011,267
_b21344
SM_b21345: SM_b21345 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,011,367 to 1,012,350
_b21345
Position (kb)
1009
1010
1011
1012 Strain fitness (log2 ratio)
-2
-1
0
1 at 1008.872 kb on - strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.073 kb on - strand, within SM_b21343 at 1009.101 kb on + strand, within SM_b21343 at 1009.697 kb on - strand at 1009.775 kb on + strand at 1009.776 kb on - strand at 1009.776 kb on - strand at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.132 kb on + strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.241 kb on + strand, within SM_b21344 at 1010.331 kb on - strand, within SM_b21344 at 1010.568 kb on + strand, within SM_b21344 at 1010.569 kb on - strand, within SM_b21344 at 1010.725 kb on + strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344 at 1010.972 kb on + strand, within SM_b21344 at 1010.972 kb on + strand, within SM_b21344 at 1010.972 kb on + strand, within SM_b21344 at 1010.972 kb on + strand, within SM_b21344 at 1010.973 kb on - strand, within SM_b21344 at 1010.973 kb on - strand, within SM_b21344 at 1010.973 kb on - strand, within SM_b21344 at 1010.973 kb on - strand, within SM_b21344 at 1011.020 kb on + strand, within SM_b21344 at 1011.020 kb on + strand, within SM_b21344 at 1011.021 kb on - strand, within SM_b21344 at 1011.070 kb on + strand, within SM_b21344 at 1011.071 kb on - strand, within SM_b21344 at 1011.267 kb on + strand at 1011.267 kb on + strand at 1011.267 kb on + strand at 1011.268 kb on - strand at 1011.268 kb on - strand at 1011.268 kb on - strand at 1011.268 kb on - strand at 1011.295 kb on - strand at 1011.411 kb on - strand at 1011.411 kb on - strand at 1011.427 kb on + strand at 1011.428 kb on - strand at 1011.616 kb on + strand, within SM_b21345 at 1011.616 kb on + strand, within SM_b21345 at 1011.617 kb on - strand, within SM_b21345 at 1011.659 kb on + strand, within SM_b21345 at 1011.932 kb on + strand, within SM_b21345 at 1011.932 kb on + strand, within SM_b21345 at 1011.932 kb on + strand, within SM_b21345 at 1012.131 kb on + strand, within SM_b21345 at 1012.131 kb on + strand, within SM_b21345 at 1012.132 kb on - strand, within SM_b21345 at 1012.132 kb on - strand, within SM_b21345 at 1012.133 kb on + strand, within SM_b21345 at 1012.133 kb on + strand, within SM_b21345 at 1012.234 kb on - strand, within SM_b21345 at 1012.234 kb on - strand, within SM_b21345 at 1012.235 kb on + strand, within SM_b21345 at 1012.235 kb on + strand, within SM_b21345 at 1012.236 kb on - strand, within SM_b21345 at 1012.236 kb on - strand, within SM_b21345
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 1,008,872 - SM_b21343 0.10 +0.8 1,009,072 + SM_b21343 0.30 -0.8 1,009,072 + SM_b21343 0.30 -0.1 1,009,072 + SM_b21343 0.30 +0.0 1,009,073 - SM_b21343 0.30 -1.5 1,009,101 + SM_b21343 0.33 -0.5 1,009,697 - -2.1 1,009,775 + +1.2 1,009,776 - -1.9 1,009,776 - +0.0 1,010,089 - SM_b21344 0.21 -0.3 1,010,089 - SM_b21344 0.21 +0.2 1,010,089 - SM_b21344 0.21 +0.2 1,010,132 + SM_b21344 0.24 -0.7 1,010,133 - SM_b21344 0.24 +0.2 1,010,133 - SM_b21344 0.24 -0.2 1,010,241 + SM_b21344 0.31 -0.5 1,010,331 - SM_b21344 0.37 -0.2 1,010,568 + SM_b21344 0.53 -0.8 1,010,569 - SM_b21344 0.53 +0.1 1,010,725 + SM_b21344 0.64 +0.8 1,010,726 - SM_b21344 0.64 -1.5 1,010,726 - SM_b21344 0.64 +0.2 1,010,972 + SM_b21344 0.80 -0.3 1,010,972 + SM_b21344 0.80 +0.3 1,010,972 + SM_b21344 0.80 -0.7 1,010,972 + SM_b21344 0.80 -0.3 1,010,973 - SM_b21344 0.80 -0.6 1,010,973 - SM_b21344 0.80 +0.4 1,010,973 - SM_b21344 0.80 +0.5 1,010,973 - SM_b21344 0.80 -0.4 1,011,020 + SM_b21344 0.83 +0.1 1,011,020 + SM_b21344 0.83 +0.9 1,011,021 - SM_b21344 0.83 -1.9 1,011,070 + SM_b21344 0.87 +0.7 1,011,071 - SM_b21344 0.87 +0.8 1,011,267 + -0.3 1,011,267 + -1.2 1,011,267 + -0.2 1,011,268 - +0.3 1,011,268 - -0.4 1,011,268 - +0.8 1,011,268 - -0.2 1,011,295 - -1.1 1,011,411 - -0.0 1,011,411 - -0.2 1,011,427 + -0.2 1,011,428 - -0.1 1,011,616 + SM_b21345 0.25 -0.5 1,011,616 + SM_b21345 0.25 +0.4 1,011,617 - SM_b21345 0.25 -0.4 1,011,659 + SM_b21345 0.30 +0.4 1,011,932 + SM_b21345 0.57 +0.7 1,011,932 + SM_b21345 0.57 -0.4 1,011,932 + SM_b21345 0.57 -0.3 1,012,131 + SM_b21345 0.78 -0.1 1,012,131 + SM_b21345 0.78 +0.4 1,012,132 - SM_b21345 0.78 -0.6 1,012,132 - SM_b21345 0.78 +0.5 1,012,133 + SM_b21345 0.78 -0.2 1,012,133 + SM_b21345 0.78 -0.3 1,012,234 - SM_b21345 0.88 -0.1 1,012,234 - SM_b21345 0.88 +0.3 1,012,235 + SM_b21345 0.88 +1.7 1,012,235 + SM_b21345 0.88 +0.3 1,012,236 - SM_b21345 0.88 -0.3 1,012,236 - SM_b21345 0.88 +0.1
Or see this region's nucleotide sequence