Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20487 and SM_b20488 are separated by 2 nucleotides SM_b20488 and SM_b20489 are separated by 44 nucleotides
SM_b20486: SM_b20486 - sugar ABC transporter permease, at 502,455 to 503,456
_b20486
SM_b20487: SM_b20487 - sugar ABC transporter permease, at 503,453 to 504,451
_b20487
SM_b20488: SM_b20488 - hypothetical protein, at 504,454 to 505,302
_b20488
SM_b20489: SM_b20489 - carbohydrate kinase, at 505,347 to 506,819
_b20489
Position (kb) 504
505
506 Strain fitness (log2 ratio) -1
0
1 at 504.050 kb on + strand, within SM_b20487 at 504.050 kb on + strand, within SM_b20487 at 504.051 kb on - strand, within SM_b20487 at 504.051 kb on - strand, within SM_b20487 at 504.051 kb on - strand, within SM_b20487 at 504.051 kb on - strand, within SM_b20487 at 504.053 kb on - strand, within SM_b20487 at 504.053 kb on - strand, within SM_b20487 at 504.053 kb on - strand, within SM_b20487 at 504.123 kb on - strand, within SM_b20487 at 504.210 kb on - strand, within SM_b20487 at 504.210 kb on - strand, within SM_b20487 at 504.475 kb on - strand at 504.475 kb on - strand at 504.475 kb on - strand at 504.475 kb on - strand at 504.475 kb on - strand at 504.475 kb on - strand at 504.541 kb on + strand, within SM_b20488 at 504.541 kb on + strand, within SM_b20488 at 504.541 kb on + strand, within SM_b20488 at 504.542 kb on - strand, within SM_b20488 at 504.542 kb on - strand, within SM_b20488 at 504.763 kb on + strand, within SM_b20488 at 504.763 kb on + strand, within SM_b20488 at 504.763 kb on + strand, within SM_b20488 at 504.764 kb on - strand, within SM_b20488 at 504.812 kb on - strand, within SM_b20488 at 504.819 kb on + strand, within SM_b20488 at 504.985 kb on - strand, within SM_b20488 at 504.988 kb on + strand, within SM_b20488 at 504.988 kb on + strand, within SM_b20488 at 504.988 kb on + strand, within SM_b20488 at 504.989 kb on - strand, within SM_b20488 at 505.026 kb on + strand, within SM_b20488 at 505.055 kb on - strand, within SM_b20488 at 505.198 kb on + strand, within SM_b20488 at 505.199 kb on - strand, within SM_b20488 at 505.199 kb on - strand, within SM_b20488 at 505.695 kb on + strand, within SM_b20489 at 505.696 kb on - strand, within SM_b20489 at 505.696 kb on - strand, within SM_b20489 at 505.698 kb on - strand, within SM_b20489 at 505.773 kb on + strand, within SM_b20489 at 505.774 kb on - strand, within SM_b20489 at 505.822 kb on - strand, within SM_b20489 at 505.822 kb on - strand, within SM_b20489 at 505.840 kb on - strand, within SM_b20489 at 506.084 kb on - strand, within SM_b20489 at 506.245 kb on + strand, within SM_b20489
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 504,050 + SM_b20487 0.60 -1.3 504,050 + SM_b20487 0.60 -0.2 504,051 - SM_b20487 0.60 -0.1 504,051 - SM_b20487 0.60 +0.4 504,051 - SM_b20487 0.60 -1.1 504,051 - SM_b20487 0.60 +0.3 504,053 - SM_b20487 0.60 -0.4 504,053 - SM_b20487 0.60 -1.2 504,053 - SM_b20487 0.60 -0.0 504,123 - SM_b20487 0.67 -0.1 504,210 - SM_b20487 0.76 +0.1 504,210 - SM_b20487 0.76 -0.6 504,475 - +0.5 504,475 - -0.1 504,475 - +0.3 504,475 - +0.3 504,475 - -1.2 504,475 - -0.9 504,541 + SM_b20488 0.10 -0.1 504,541 + SM_b20488 0.10 -0.7 504,541 + SM_b20488 0.10 -0.5 504,542 - SM_b20488 0.10 -1.3 504,542 - SM_b20488 0.10 -0.1 504,763 + SM_b20488 0.36 +0.2 504,763 + SM_b20488 0.36 +1.0 504,763 + SM_b20488 0.36 -0.6 504,764 - SM_b20488 0.37 -0.4 504,812 - SM_b20488 0.42 +0.2 504,819 + SM_b20488 0.43 +0.5 504,985 - SM_b20488 0.63 +0.6 504,988 + SM_b20488 0.63 -0.9 504,988 + SM_b20488 0.63 +0.1 504,988 + SM_b20488 0.63 -0.6 504,989 - SM_b20488 0.63 -0.3 505,026 + SM_b20488 0.67 -0.5 505,055 - SM_b20488 0.71 +0.2 505,198 + SM_b20488 0.88 +0.1 505,199 - SM_b20488 0.88 -0.1 505,199 - SM_b20488 0.88 -0.3 505,695 + SM_b20489 0.24 -0.5 505,696 - SM_b20489 0.24 -0.1 505,696 - SM_b20489 0.24 +0.0 505,698 - SM_b20489 0.24 +0.7 505,773 + SM_b20489 0.29 -0.4 505,774 - SM_b20489 0.29 -0.2 505,822 - SM_b20489 0.32 +0.7 505,822 - SM_b20489 0.32 -0.2 505,840 - SM_b20489 0.33 +1.3 506,084 - SM_b20489 0.50 +0.6 506,245 + SM_b20489 0.61 -1.2
Or see this region's nucleotide sequence