Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20349 and SM_b20350 are separated by 165 nucleotides SM_b20350 and SM_b20351 overlap by 4 nucleotides SM_b20351 and SM_b20352 overlap by 1 nucleotides
SM_b20349: SM_b20349 - sugar ABC transporter, at 356,464 to 357,405
_b20349
SM_b20350: SM_b20350 - hypothetical protein, at 357,571 to 358,215
_b20350
SM_b20351: SM_b20351 - sugar ABC transporter ATP-binding protein, at 358,212 to 359,762
_b20351
SM_b20352: SM_b20352 - sugar ABC transporter permease, at 359,762 to 360,826
_b20352
Position (kb) 358
359
360 Strain fitness (log2 ratio) -2
-1
0
1 at 357.259 kb on + strand, within SM_b20349 at 357.260 kb on - strand, within SM_b20349 at 357.298 kb on + strand, within SM_b20349 at 357.299 kb on - strand, within SM_b20349 at 357.739 kb on + strand, within SM_b20350 at 357.817 kb on + strand, within SM_b20350 at 357.885 kb on + strand, within SM_b20350 at 357.886 kb on - strand, within SM_b20350 at 357.914 kb on - strand, within SM_b20350 at 358.275 kb on + strand at 358.284 kb on - strand at 358.285 kb on + strand at 358.286 kb on - strand at 358.725 kb on - strand, within SM_b20351 at 358.821 kb on + strand, within SM_b20351 at 358.822 kb on - strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.922 kb on + strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351 at 359.248 kb on + strand, within SM_b20351 at 359.249 kb on - strand, within SM_b20351 at 359.348 kb on + strand, within SM_b20351 at 359.348 kb on + strand, within SM_b20351 at 359.349 kb on - strand, within SM_b20351 at 359.349 kb on - strand, within SM_b20351 at 359.530 kb on + strand, within SM_b20351 at 359.531 kb on - strand, within SM_b20351 at 359.531 kb on - strand, within SM_b20351 at 359.531 kb on - strand, within SM_b20351 at 359.717 kb on - strand at 359.738 kb on + strand at 359.738 kb on + strand at 359.815 kb on - strand at 359.914 kb on - strand, within SM_b20352 at 359.914 kb on - strand, within SM_b20352 at 360.087 kb on - strand, within SM_b20352 at 360.163 kb on + strand, within SM_b20352 at 360.377 kb on + strand, within SM_b20352 at 360.390 kb on - strand, within SM_b20352 at 360.392 kb on - strand, within SM_b20352 at 360.392 kb on - strand, within SM_b20352 at 360.392 kb on - strand, within SM_b20352 at 360.486 kb on - strand, within SM_b20352 at 360.486 kb on - strand, within SM_b20352 at 360.486 kb on - strand, within SM_b20352
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 357,259 + SM_b20349 0.84 +1.1 357,260 - SM_b20349 0.85 +0.0 357,298 + SM_b20349 0.89 +0.7 357,299 - SM_b20349 0.89 +0.0 357,739 + SM_b20350 0.26 -0.7 357,817 + SM_b20350 0.38 +0.4 357,885 + SM_b20350 0.49 -0.2 357,886 - SM_b20350 0.49 +0.5 357,914 - SM_b20350 0.53 -0.1 358,275 + +1.3 358,284 - -0.4 358,285 + -0.0 358,286 - +0.7 358,725 - SM_b20351 0.33 +0.0 358,821 + SM_b20351 0.39 -1.1 358,822 - SM_b20351 0.39 -0.4 358,863 + SM_b20351 0.42 -0.3 358,863 + SM_b20351 0.42 +0.1 358,864 - SM_b20351 0.42 -0.1 358,864 - SM_b20351 0.42 +0.5 358,864 - SM_b20351 0.42 +0.8 358,922 + SM_b20351 0.46 +0.2 359,078 - SM_b20351 0.56 +0.2 359,078 - SM_b20351 0.56 -1.1 359,103 + SM_b20351 0.57 -0.3 359,103 + SM_b20351 0.57 -1.7 359,104 - SM_b20351 0.58 +0.4 359,104 - SM_b20351 0.58 -0.9 359,248 + SM_b20351 0.67 +0.2 359,249 - SM_b20351 0.67 +0.2 359,348 + SM_b20351 0.73 -0.8 359,348 + SM_b20351 0.73 +0.3 359,349 - SM_b20351 0.73 -1.0 359,349 - SM_b20351 0.73 -1.8 359,530 + SM_b20351 0.85 +0.2 359,531 - SM_b20351 0.85 -0.2 359,531 - SM_b20351 0.85 -0.9 359,531 - SM_b20351 0.85 +1.6 359,717 - +0.6 359,738 + +0.1 359,738 + -1.3 359,815 - +0.7 359,914 - SM_b20352 0.14 -0.0 359,914 - SM_b20352 0.14 -2.2 360,087 - SM_b20352 0.31 -0.6 360,163 + SM_b20352 0.38 -0.3 360,377 + SM_b20352 0.58 -0.1 360,390 - SM_b20352 0.59 -0.2 360,392 - SM_b20352 0.59 -0.0 360,392 - SM_b20352 0.59 -0.2 360,392 - SM_b20352 0.59 +0.3 360,486 - SM_b20352 0.68 -0.6 360,486 - SM_b20352 0.68 +0.1 360,486 - SM_b20352 0.68 +0.3
Or see this region's nucleotide sequence