Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07795

Experiment: 4-Hydroxybenzoic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt RR42_RS07795: RR42_RS07795 - chemotaxis protein, at 1,667,981 to 1,669,690 _RS07795 Position (kb) 1667 1668 1669 1670Strain fitness (log2 ratio) -1 0 1at 1667.143 kb on + strandat 1667.213 kb on + strandat 1667.214 kb on - strandat 1667.214 kb on - strandat 1667.214 kb on - strandat 1667.214 kb on - strandat 1667.338 kb on - strandat 1667.347 kb on + strandat 1667.347 kb on + strandat 1667.384 kb on + strandat 1667.385 kb on - strandat 1667.385 kb on - strandat 1667.530 kb on - strandat 1667.530 kb on - strandat 1667.530 kb on - strandat 1667.763 kb on - strandat 1667.774 kb on + strandat 1667.775 kb on - strandat 1668.031 kb on + strandat 1668.245 kb on + strand, within RR42_RS07795at 1668.246 kb on - strand, within RR42_RS07795at 1668.467 kb on - strand, within RR42_RS07795at 1668.467 kb on - strand, within RR42_RS07795at 1668.589 kb on + strand, within RR42_RS07795at 1668.908 kb on + strand, within RR42_RS07795at 1669.196 kb on - strand, within RR42_RS07795at 1669.196 kb on - strand, within RR42_RS07795at 1669.200 kb on + strand, within RR42_RS07795at 1669.201 kb on - strand, within RR42_RS07795at 1669.230 kb on + strand, within RR42_RS07795at 1669.391 kb on - strand, within RR42_RS07795at 1669.391 kb on - strand, within RR42_RS07795at 1669.488 kb on - strand, within RR42_RS07795at 1669.644 kb on - strandat 1669.644 kb on - strandat 1669.790 kb on - strandat 1669.889 kb on - strandat 1669.911 kb on - strandat 1670.363 kb on - strandat 1670.402 kb on - strandat 1670.406 kb on + strandat 1670.406 kb on + strandat 1670.406 kb on + strandat 1670.407 kb on - strandat 1670.441 kb on - strandat 1670.446 kb on - strandat 1670.680 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C)
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1,667,143 + +0.3
1,667,213 + -0.9
1,667,214 - -0.6
1,667,214 - +0.1
1,667,214 - -0.1
1,667,214 - +0.3
1,667,338 - -0.7
1,667,347 + +0.5
1,667,347 + -1.0
1,667,384 + +0.6
1,667,385 - -0.3
1,667,385 - -0.3
1,667,530 - +1.7
1,667,530 - +1.4
1,667,530 - -0.1
1,667,763 - +0.2
1,667,774 + -0.1
1,667,775 - +0.9
1,668,031 + -1.1
1,668,245 + RR42_RS07795 0.15 +0.4
1,668,246 - RR42_RS07795 0.15 +1.2
1,668,467 - RR42_RS07795 0.28 -1.3
1,668,467 - RR42_RS07795 0.28 -1.3
1,668,589 + RR42_RS07795 0.36 +0.4
1,668,908 + RR42_RS07795 0.54 -0.2
1,669,196 - RR42_RS07795 0.71 -0.8
1,669,196 - RR42_RS07795 0.71 +0.1
1,669,200 + RR42_RS07795 0.71 +0.5
1,669,201 - RR42_RS07795 0.71 +0.3
1,669,230 + RR42_RS07795 0.73 -0.4
1,669,391 - RR42_RS07795 0.82 +0.1
1,669,391 - RR42_RS07795 0.82 -0.1
1,669,488 - RR42_RS07795 0.88 -0.4
1,669,644 - -1.1
1,669,644 - +0.1
1,669,790 - +0.6
1,669,889 - -0.1
1,669,911 - +0.4
1,670,363 - +0.0
1,670,402 - +1.3
1,670,406 + -1.3
1,670,406 + -0.1
1,670,406 + +0.9
1,670,407 - -0.5
1,670,441 - +0.4
1,670,446 - +0.9
1,670,680 - -0.5

Or see this region's nucleotide sequence