Experiment: Cisplatin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4198 and Pf6N2E2_4199 are separated by 39 nucleotides Pf6N2E2_4199 and Pf6N2E2_4200 are separated by 927 nucleotides
Pf6N2E2_4198 - DNA polymerase III beta subunit (EC 2.7.7.7), at 4,886,301 to 4,887,404
_4198
Pf6N2E2_4199 - Chromosomal replication initiator protein DnaA, at 4,887,444 to 4,888,964
_4199
Pf6N2E2_4200 - Ribonuclease P protein component (EC 3.1.26.5), at 4,889,892 to 4,890,089
_4200
Position (kb)
4887
4888
4889 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4887.423 kb on - strand at 4887.423 kb on - strand at 4887.423 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4887.426 kb on - strand at 4889.040 kb on - strand at 4889.040 kb on - strand at 4889.072 kb on + strand at 4889.073 kb on - strand at 4889.073 kb on - strand at 4889.073 kb on - strand at 4889.272 kb on + strand at 4889.284 kb on + strand at 4889.332 kb on + strand at 4889.358 kb on + strand at 4889.371 kb on + strand at 4889.371 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.377 kb on + strand at 4889.379 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.383 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand at 4889.422 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.008 mg/ml remove 4,887,423 - +1.1 4,887,423 - -0.4 4,887,423 - -2.8 4,887,426 - +0.7 4,887,426 - +0.0 4,887,426 - -0.6 4,887,426 - -0.1 4,887,426 - -2.1 4,889,040 - -2.7 4,889,040 - -3.1 4,889,072 + -1.0 4,889,073 - -4.1 4,889,073 - -3.6 4,889,073 - -3.0 4,889,272 + +0.7 4,889,284 + +0.2 4,889,332 + -0.5 4,889,358 + +0.3 4,889,371 + +0.5 4,889,371 + -0.6 4,889,377 + +0.2 4,889,377 + +0.3 4,889,377 + +0.3 4,889,377 + -0.0 4,889,377 + +0.4 4,889,379 + +0.4 4,889,383 + +1.5 4,889,383 + -0.2 4,889,383 + +0.8 4,889,383 + +0.3 4,889,422 + +0.7 4,889,422 + +0.0 4,889,422 + +1.6 4,889,422 + +0.6 4,889,422 + -0.0
Or see this region's nucleotide sequence