Experiment: sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_888 and Pf1N1B4_889 are separated by 129 nucleotides Pf1N1B4_889 and Pf1N1B4_890 are separated by 98 nucleotides Pf1N1B4_890 and Pf1N1B4_891 are separated by 171 nucleotides
Pf1N1B4_888 - Transglycosylase, Slt family, at 1,014,406 to 1,015,866
_888
Pf1N1B4_889 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 1,015,996 to 1,016,742
_889
Pf1N1B4_890 - DNA recombination and repair protein RecO, at 1,016,841 to 1,017,530
_890
Pf1N1B4_891 - GTP-binding protein Era, at 1,017,702 to 1,018,604
_891
Position (kb)
1016
1017
1018 Strain fitness (log2 ratio)
-2
-1
0
1 at 1015.864 kb on + strand at 1015.865 kb on - strand at 1015.865 kb on - strand at 1015.865 kb on - strand at 1016.760 kb on - strand at 1016.783 kb on + strand at 1016.783 kb on + strand at 1016.783 kb on + strand at 1016.783 kb on + strand at 1016.784 kb on - strand at 1016.784 kb on - strand at 1016.784 kb on - strand at 1016.784 kb on - strand at 1016.784 kb on - strand at 1016.828 kb on - strand at 1016.843 kb on - strand at 1016.849 kb on + strand at 1016.871 kb on + strand at 1016.872 kb on - strand at 1016.872 kb on - strand at 1016.872 kb on - strand at 1017.010 kb on + strand at 1017.010 kb on + strand, within Pf1N1B4_890 at 1017.011 kb on - strand, within Pf1N1B4_890 at 1017.011 kb on - strand, within Pf1N1B4_890 at 1017.039 kb on + strand, within Pf1N1B4_890 at 1017.039 kb on + strand, within Pf1N1B4_890 at 1017.040 kb on - strand, within Pf1N1B4_890 at 1017.040 kb on - strand at 1017.046 kb on + strand, within Pf1N1B4_890 at 1017.193 kb on + strand, within Pf1N1B4_890 at 1017.260 kb on - strand, within Pf1N1B4_890 at 1017.496 kb on + strand at 1017.497 kb on - strand at 1017.497 kb on - strand at 1017.565 kb on + strand at 1017.565 kb on + strand at 1017.565 kb on + strand at 1017.566 kb on - strand at 1017.566 kb on - strand at 1017.616 kb on + strand at 1017.617 kb on - strand at 1017.617 kb on - strand at 1017.641 kb on + strand at 1017.641 kb on + strand at 1017.642 kb on - strand at 1017.642 kb on - strand at 1017.680 kb on + strand at 1017.680 kb on + strand at 1017.681 kb on - strand at 1017.681 kb on - strand at 1017.703 kb on + strand at 1017.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 12.5 mM remove 1,015,864 + -1.4 1,015,865 - +0.4 1,015,865 - +0.3 1,015,865 - +0.3 1,016,760 - -1.8 1,016,783 + -0.8 1,016,783 + +0.1 1,016,783 + +0.4 1,016,783 + -1.6 1,016,784 - +0.5 1,016,784 - +0.0 1,016,784 - +0.5 1,016,784 - +1.4 1,016,784 - +0.2 1,016,828 - +0.1 1,016,843 - -0.1 1,016,849 + +0.2 1,016,871 + -0.0 1,016,872 - +1.0 1,016,872 - +0.4 1,016,872 - -0.9 1,017,010 + -0.6 1,017,010 + Pf1N1B4_890 0.24 -0.2 1,017,011 - Pf1N1B4_890 0.25 -0.6 1,017,011 - Pf1N1B4_890 0.25 -0.2 1,017,039 + Pf1N1B4_890 0.29 +0.9 1,017,039 + Pf1N1B4_890 0.29 -1.4 1,017,040 - Pf1N1B4_890 0.29 +0.4 1,017,040 - -1.2 1,017,046 + Pf1N1B4_890 0.30 -0.3 1,017,193 + Pf1N1B4_890 0.51 -0.2 1,017,260 - Pf1N1B4_890 0.61 -1.2 1,017,496 + +0.5 1,017,497 - +1.0 1,017,497 - +0.8 1,017,565 + -0.2 1,017,565 + +0.4 1,017,565 + +1.0 1,017,566 - -2.2 1,017,566 - -0.5 1,017,616 + +1.1 1,017,617 - +0.4 1,017,617 - -0.9 1,017,641 + +0.4 1,017,641 + +1.1 1,017,642 - +0.9 1,017,642 - -0.6 1,017,680 + +0.9 1,017,680 + +0.9 1,017,681 - +1.4 1,017,681 - -0.6 1,017,703 + +0.7 1,017,704 - -0.4
Or see this region's nucleotide sequence