Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_550

Experiment: sodium fluoride 12.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 12.5 mM
646,122	+		Pf1N1B4_548	0.83	-1.0
646,160	+		Pf1N1B4_548	0.87	+1.0
646,160	+		Pf1N1B4_548	0.87	+0.7
646,160	+		Pf1N1B4_548	0.87	-0.6
646,161	-		Pf1N1B4_548	0.87	-0.0
646,161	-		Pf1N1B4_548	0.87	+0.3
646,161	-		Pf1N1B4_548	0.87	-0.3
646,161	-		Pf1N1B4_548	0.87	+0.8
646,161	-		Pf1N1B4_548	0.87	+0.4
646,161	-		Pf1N1B4_548	0.87	-0.2
646,161	-		Pf1N1B4_548	0.87	+1.7
646,166	+		Pf1N1B4_548	0.88	-0.3
646,289	+				-0.5
646,289	+				+0.0
646,289	+				-0.6
646,289	+				-0.2
646,289	+				-1.3
646,289	+				+0.7
646,289	+				+0.3
646,289	+				+1.3
646,289	+				-0.7
646,289	+				-0.9
646,289	+				-0.5
646,289	+				-0.0
646,290	-				+0.3
646,290	-				+1.6
646,290	-				+0.3
646,290	-				+0.7
646,290	-				-0.1
646,290	-				+0.3
646,290	-				+1.1
646,290	-				-0.0
646,290	-				-0.0
646,290	-				+1.5
646,290	-				-0.9
646,290	-				-0.3
646,290	-				+0.3
646,290	-				-1.9
646,293	+				+0.2
646,293	+				-0.4
646,293	+				+1.3
646,293	+				-0.3
646,293	+				-1.2
646,293	+				+1.1
646,293	+				+0.7
646,294	-				-0.9
646,294	-				-1.0
646,294	-				+0.1
646,294	-				-0.0
646,330	+				-0.9
646,451	+		Pf1N1B4_549	0.20	+1.0
646,558	+				-0.3
646,558	+		Pf1N1B4_549	0.33	+0.5
646,558	+		Pf1N1B4_549	0.33	-0.1
646,558	+		Pf1N1B4_549	0.33	+2.0
646,558	+		Pf1N1B4_549	0.33	-0.0
646,559	-		Pf1N1B4_549	0.33	-0.7
646,559	-		Pf1N1B4_549	0.33	-0.3
646,559	-		Pf1N1B4_549	0.33	+0.3
646,559	-		Pf1N1B4_549	0.33	-0.2
646,559	-		Pf1N1B4_549	0.33	-0.7
646,559	-		Pf1N1B4_549	0.33	-0.7
646,559	-		Pf1N1B4_549	0.33	-1.0
646,559	-		Pf1N1B4_549	0.33	+0.2
646,559	-		Pf1N1B4_549	0.33	+0.7
646,559	-				+0.6
646,559	-		Pf1N1B4_549	0.33	+0.4
646,559	-		Pf1N1B4_549	0.33	-1.3
646,559	-		Pf1N1B4_549	0.33	-0.7
646,559	-		Pf1N1B4_549	0.33	+0.3
646,559	-		Pf1N1B4_549	0.33	-0.9
646,559	-		Pf1N1B4_549	0.33	-0.0
646,559	-		Pf1N1B4_549	0.33	-2.2
646,562	+		Pf1N1B4_549	0.33	-0.3
646,562	+		Pf1N1B4_549	0.33	-2.8
646,562	+		Pf1N1B4_549	0.33	-1.2
646,562	+		Pf1N1B4_549	0.33	-1.4
646,562	+		Pf1N1B4_549	0.33	+0.2
646,563	-		Pf1N1B4_549	0.33	-1.1
646,563	-		Pf1N1B4_549	0.33	+1.0
646,632	-				-0.3
646,632	-		Pf1N1B4_549	0.42	+0.0
646,632	-		Pf1N1B4_549	0.42	+0.1
646,834	+				-0.0
646,834	+		Pf1N1B4_549	0.67	-1.3
646,835	-		Pf1N1B4_549	0.67	-0.7
646,835	-		Pf1N1B4_549	0.67	-0.1
646,860	-		Pf1N1B4_549	0.70	+0.2
646,860	-		Pf1N1B4_549	0.70	+0.6
646,860	-		Pf1N1B4_549	0.70	+0.5
646,860	-				+2.3
646,957	+		Pf1N1B4_549	0.82	-0.4
646,961	+		Pf1N1B4_549	0.83	+0.7
646,961	+		Pf1N1B4_549	0.83	-1.3
646,961	+		Pf1N1B4_549	0.83	+0.8
646,962	-		Pf1N1B4_549	0.83	+0.2
646,962	-		Pf1N1B4_549	0.83	-0.7
647,100	+				-2.2
647,100	+				-0.7
647,101	-				-0.4
647,101	-				-1.0
647,101	-				-0.2
647,101	-				-1.0
647,269	+		Pf1N1B4_550	0.30	-0.9
647,269	+		Pf1N1B4_550	0.30	-1.7
647,269	+		Pf1N1B4_550	0.30	-0.4
647,270	-		Pf1N1B4_550	0.30	-0.5
647,270	-		Pf1N1B4_550	0.30	+0.9
647,270	-		Pf1N1B4_550	0.30	+1.0
647,270	-		Pf1N1B4_550	0.30	-1.3
647,270	-		Pf1N1B4_550	0.30	-0.9
647,270	-		Pf1N1B4_550	0.30	-1.1
647,287	+		Pf1N1B4_550	0.33	+2.3
647,288	-		Pf1N1B4_550	0.34	-1.7
647,288	-		Pf1N1B4_550	0.34	-1.9
647,325	+				+1.3
647,325	+		Pf1N1B4_550	0.40	+0.9
647,325	+		Pf1N1B4_550	0.40	-1.2
647,326	-		Pf1N1B4_550	0.40	+3.3
647,413	-		Pf1N1B4_550	0.56	-0.9
647,522	-		Pf1N1B4_550	0.75	-0.6
647,662	+				-1.5
647,662	+				+1.3
647,662	+				-0.7
647,663	-				-0.1
647,714	-				-0.0
647,714	-				+0.1
647,714	-				+0.0
647,721	-				-0.1
647,836	+				+0.5
647,836	+				-1.0
647,836	+				-0.0
647,836	+				+0.6
647,836	+				+0.3
647,836	+				-0.9
647,836	+				+0.4
647,836	+				-1.5
647,836	+				+1.3
647,836	+				+1.1
647,836	+				-0.0
647,836	+				+0.3
647,836	+				+0.7
647,836	+				-0.7
647,836	+				+0.6
647,836	+				+0.6
647,837	-				+0.3
647,837	-				-0.6
647,837	-				+0.3
647,837	-				-0.4
647,837	-				+1.7
647,837	-				+0.3
647,837	-				-1.0
647,837	-				-0.5
647,837	-				-1.0
647,837	-				-1.2
647,837	-				+1.0
647,837	-				+0.6
647,837	-				+0.3
647,837	-				-0.3
647,837	-				-2.2
647,837	-				+1.3
647,837	-				+2.9
647,837	-				-0.3
647,837	-				+1.3
647,837	-				-1.9
647,837	-				-0.0
647,837	-				-0.3
647,837	-				-0.5
647,838	+				-1.0
647,838	+				-0.6
647,838	+				+0.6
647,838	+				-0.7
647,838	+				-0.0
647,838	+				-2.2
647,838	+				-0.5
647,839	-				-0.3
647,839	-				+0.2
647,839	-				+0.3
647,839	-				+1.3
647,839	-				-0.4
647,839	-				-0.9
647,842	+				+0.6
647,842	+				-2.5
647,842	+				+0.3
647,842	+				+0.5
647,842	+				-0.2
647,842	+				+1.9
647,842	+				+1.6
647,842	+				-0.7
647,842	+				+0.7
647,842	+				+1.0
647,843	-				-0.0
647,843	-				-0.5
647,843	-				-1.0
647,843	-				+1.3
647,843	-				-0.7
647,843	-				+0.7
647,843	-				-0.5
647,843	-				+0.1
647,845	+				+0.6
647,845	+				-0.7
647,845	+				+0.3
647,845	+				+1.3
647,846	-				-1.0
647,929	+				-1.2
647,930	-				+2.9
647,930	-				+0.7
648,068	+		Pf1N1B4_551	0.17	-1.0
648,069	-		Pf1N1B4_551	0.17	-1.7
648,124	+		Pf1N1B4_551	0.20	-2.2
648,124	+		Pf1N1B4_551	0.20	-0.3
648,124	+		Pf1N1B4_551	0.20	+0.4
648,124	+		Pf1N1B4_551	0.20	-2.6
648,124	+		Pf1N1B4_551	0.20	+0.6
648,124	+		Pf1N1B4_551	0.20	-1.0
648,124	+		Pf1N1B4_551	0.20	+0.7
648,125	-		Pf1N1B4_551	0.20	-0.9
648,125	-		Pf1N1B4_551	0.20	+1.9
648,125	-		Pf1N1B4_551	0.20	+1.0
648,125	-		Pf1N1B4_551	0.20	+1.0
648,125	-				+0.3
648,125	-		Pf1N1B4_551	0.20	-0.5
648,125	-		Pf1N1B4_551	0.20	-0.3
648,125	-		Pf1N1B4_551	0.20	+0.6
648,125	-		Pf1N1B4_551	0.20	+0.6
648,125	-		Pf1N1B4_551	0.20	+0.0
648,125	-		Pf1N1B4_551	0.20	+1.8
648,125	-		Pf1N1B4_551	0.20	-0.1
648,125	-		Pf1N1B4_551	0.20	-0.2
648,125	-		Pf1N1B4_551	0.20	-0.6
648,353	-				+1.3
648,355	+		Pf1N1B4_551	0.33	-0.5
648,355	+		Pf1N1B4_551	0.33	-1.7
648,355	+		Pf1N1B4_551	0.33	-1.5
648,355	+		Pf1N1B4_551	0.33	-0.1
648,355	+		Pf1N1B4_551	0.33	-2.0
648,356	-		Pf1N1B4_551	0.33	+0.6
648,356	-		Pf1N1B4_551	0.33	+0.2
648,356	-		Pf1N1B4_551	0.33	+0.3
648,436	+		Pf1N1B4_551	0.37	+0.3
648,436	+		Pf1N1B4_551	0.37	+0.7
648,490	+		Pf1N1B4_551	0.40	+0.3
648,491	-		Pf1N1B4_551	0.40	+0.7