Experiment: sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_5451 - hypothetical protein, at 197,785 to 198,030
_5451
Position (kb) 197
198
199 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 196.835 kb on + strand at 196.835 kb on + strand at 196.835 kb on + strand at 196.836 kb on - strand at 196.876 kb on + strand at 197.012 kb on + strand at 197.012 kb on + strand at 197.013 kb on - strand at 197.039 kb on + strand at 197.040 kb on - strand at 197.154 kb on + strand at 197.162 kb on + strand at 197.162 kb on + strand at 197.163 kb on - strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.242 kb on - strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.339 kb on - strand at 197.339 kb on - strand at 197.339 kb on - strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.378 kb on - strand at 197.378 kb on - strand at 197.388 kb on + strand at 197.422 kb on + strand at 197.425 kb on + strand at 197.425 kb on + strand at 197.475 kb on - strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.562 kb on - strand at 197.562 kb on - strand at 197.623 kb on + strand at 197.623 kb on + strand at 197.624 kb on - strand at 197.639 kb on + strand at 197.735 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.780 kb on + strand at 197.781 kb on - strand at 197.781 kb on - strand at 197.809 kb on - strand at 197.856 kb on + strand, within Pf1N1B4_5451 at 197.857 kb on - strand, within Pf1N1B4_5451 at 197.943 kb on - strand, within Pf1N1B4_5451 at 197.957 kb on + strand at 197.957 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 198.028 kb on + strand at 198.029 kb on - strand at 198.029 kb on - strand at 198.029 kb on - strand at 198.072 kb on + strand at 198.072 kb on + strand at 198.073 kb on - strand at 198.081 kb on + strand at 198.206 kb on + strand at 198.206 kb on + strand at 198.273 kb on + strand at 198.273 kb on + strand at 198.273 kb on + strand at 198.282 kb on + strand at 198.283 kb on - strand at 198.283 kb on - strand at 198.283 kb on - strand at 198.309 kb on + strand at 198.309 kb on + strand at 198.309 kb on + strand at 198.404 kb on - strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.635 kb on + strand at 198.636 kb on - strand at 198.636 kb on - strand at 198.661 kb on + strand at 198.709 kb on + strand at 198.709 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.794 kb on - strand at 198.895 kb on - strand at 198.981 kb on + strand at 198.982 kb on - strand at 198.982 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 12.5 mM remove 196,835 + -1.6 196,835 + +1.0 196,835 + -0.4 196,836 - +0.6 196,876 + -0.2 197,012 + -0.2 197,012 + -0.5 197,013 - +0.1 197,039 + -1.5 197,040 - -0.2 197,154 + +0.3 197,162 + -0.3 197,162 + -0.1 197,163 - -1.9 197,241 + -1.4 197,241 + -0.3 197,241 + -0.3 197,241 + -0.2 197,241 + -0.3 197,242 - -0.3 197,310 + -3.0 197,310 + -2.4 197,310 + -0.6 197,310 + -0.2 197,310 + +0.4 197,311 - +0.7 197,311 - +1.7 197,311 - -0.8 197,311 - -0.8 197,339 - +0.5 197,339 - +0.1 197,339 - +1.0 197,342 + -0.2 197,342 + -0.1 197,342 + -0.3 197,342 + -2.3 197,342 + -0.9 197,343 - +0.5 197,343 - +2.0 197,343 - -1.1 197,343 - -0.6 197,343 - -1.4 197,343 - -1.4 197,343 - +0.7 197,343 - -0.9 197,378 - -0.4 197,378 - +0.1 197,388 + -0.5 197,422 + -1.6 197,425 + -0.5 197,425 + +1.1 197,475 - -0.3 197,537 + -0.4 197,537 + -1.8 197,537 + -0.1 197,562 - +0.1 197,562 - -0.6 197,623 + -0.6 197,623 + +1.1 197,624 - +0.4 197,639 + -0.2 197,735 + -0.9 197,741 + +1.4 197,741 + -1.2 197,741 + -0.4 197,741 + -1.1 197,780 + +0.1 197,781 - -0.2 197,781 - -0.5 197,809 - +0.2 197,856 + Pf1N1B4_5451 0.29 -0.7 197,857 - Pf1N1B4_5451 0.29 -1.6 197,943 - Pf1N1B4_5451 0.64 -0.2 197,957 + +0.4 197,957 + Pf1N1B4_5451 0.70 +0.4 197,992 + Pf1N1B4_5451 0.84 -0.2 197,992 + Pf1N1B4_5451 0.84 -1.8 197,992 + Pf1N1B4_5451 0.84 -1.6 197,992 + Pf1N1B4_5451 0.84 -0.0 198,028 + -0.4 198,029 - -0.4 198,029 - -1.6 198,029 - -0.9 198,072 + -1.3 198,072 + -0.9 198,073 - -0.0 198,081 + -1.8 198,206 + +0.4 198,206 + -0.2 198,273 + +1.4 198,273 + +0.4 198,273 + +0.7 198,282 + +0.7 198,283 - -0.1 198,283 - -1.6 198,283 - +0.7 198,309 + +0.7 198,309 + +0.8 198,309 + +0.6 198,404 - +0.3 198,441 + +1.1 198,441 + -0.4 198,441 + +0.7 198,441 + -0.7 198,441 + -1.5 198,441 + -0.0 198,441 + +1.1 198,442 - -1.4 198,442 - +1.4 198,442 - -0.2 198,442 - +0.4 198,442 - +0.4 198,635 + +0.5 198,636 - -0.2 198,636 - -0.6 198,661 + +1.3 198,709 + -0.4 198,709 + -1.6 198,793 + -0.6 198,793 + -0.3 198,793 + +0.9 198,793 + -0.5 198,793 + +2.0 198,794 - -0.2 198,895 - -1.1 198,981 + -0.3 198,982 - -1.8 198,982 - -0.6
Or see this region's nucleotide sequence