Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01480 and HSERO_RS01485 are separated by 9 nucleotides HSERO_RS01485 and HSERO_RS01490 are separated by 179 nucleotides
HSERO_RS01480: HSERO_RS01480 - heat-shock protein, at 318,640 to 319,896
_RS01480
HSERO_RS01485: HSERO_RS01485 - hypothetical protein, at 319,906 to 320,748
_RS01485
HSERO_RS01490: HSERO_RS01490 - guanylate cyclase, at 320,928 to 323,201
_RS01490
Position (kb) 319
320
321 Strain fitness (log2 ratio) -2
-1
0
1
2 at 319.000 kb on - strand, within HSERO_RS01480 at 319.003 kb on + strand, within HSERO_RS01480 at 319.011 kb on - strand, within HSERO_RS01480 at 319.334 kb on - strand, within HSERO_RS01480 at 319.334 kb on - strand, within HSERO_RS01480 at 319.375 kb on + strand, within HSERO_RS01480 at 319.421 kb on + strand, within HSERO_RS01480 at 319.508 kb on + strand, within HSERO_RS01480 at 319.620 kb on - strand, within HSERO_RS01480 at 319.707 kb on - strand, within HSERO_RS01480 at 319.826 kb on - strand at 319.961 kb on + strand at 320.033 kb on - strand, within HSERO_RS01485 at 320.069 kb on + strand, within HSERO_RS01485 at 320.099 kb on + strand, within HSERO_RS01485 at 320.224 kb on + strand, within HSERO_RS01485 at 320.325 kb on + strand, within HSERO_RS01485 at 320.445 kb on + strand, within HSERO_RS01485 at 320.445 kb on + strand, within HSERO_RS01485 at 320.592 kb on - strand, within HSERO_RS01485 at 320.648 kb on + strand, within HSERO_RS01485 at 320.656 kb on - strand, within HSERO_RS01485 at 320.656 kb on - strand, within HSERO_RS01485 at 320.777 kb on + strand at 320.814 kb on + strand at 321.009 kb on + strand at 321.010 kb on - strand at 321.014 kb on + strand at 321.232 kb on + strand, within HSERO_RS01490 at 321.265 kb on + strand, within HSERO_RS01490 at 321.336 kb on + strand, within HSERO_RS01490 at 321.734 kb on + strand, within HSERO_RS01490
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 319,000 - HSERO_RS01480 0.29 +0.4 319,003 + HSERO_RS01480 0.29 +0.4 319,011 - HSERO_RS01480 0.30 +2.5 319,334 - HSERO_RS01480 0.55 +1.6 319,334 - HSERO_RS01480 0.55 -1.9 319,375 + HSERO_RS01480 0.58 +0.4 319,421 + HSERO_RS01480 0.62 +1.2 319,508 + HSERO_RS01480 0.69 -0.2 319,620 - HSERO_RS01480 0.78 +1.4 319,707 - HSERO_RS01480 0.85 +0.6 319,826 - +1.0 319,961 + +0.5 320,033 - HSERO_RS01485 0.15 -1.3 320,069 + HSERO_RS01485 0.19 +0.4 320,099 + HSERO_RS01485 0.23 -0.4 320,224 + HSERO_RS01485 0.38 -1.0 320,325 + HSERO_RS01485 0.50 +0.0 320,445 + HSERO_RS01485 0.64 -0.3 320,445 + HSERO_RS01485 0.64 +0.7 320,592 - HSERO_RS01485 0.81 +0.5 320,648 + HSERO_RS01485 0.88 +0.1 320,656 - HSERO_RS01485 0.89 +1.0 320,656 - HSERO_RS01485 0.89 +0.8 320,777 + +0.0 320,814 + +0.3 321,009 + +0.8 321,010 - -2.5 321,014 + +2.5 321,232 + HSERO_RS01490 0.13 +0.3 321,265 + HSERO_RS01490 0.15 -0.8 321,336 + HSERO_RS01490 0.18 +1.6 321,734 + HSERO_RS01490 0.35 -1.0
Or see this region's nucleotide sequence