Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03326

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,505,595	-				-0.9
3,505,741	+		CCNA_03324	0.13	-0.9
3,505,812	+		CCNA_03324	0.29	-0.6
3,505,849	-		CCNA_03324	0.38	-0.5
3,505,897	-		CCNA_03324	0.49	+0.7
3,505,897	-		CCNA_03324	0.49	-0.7
3,505,975	-		CCNA_03324	0.67	+0.9
3,506,002	+		CCNA_03324	0.73	+0.6
3,506,036	+		CCNA_03324	0.81	+1.4
3,506,036	+		CCNA_03324	0.81	-1.0
3,506,036	+		CCNA_03324	0.81	-0.2
3,506,036	+		CCNA_03324	0.81	+2.1
3,506,036	+		CCNA_03324	0.81	+1.2
3,506,042	-		CCNA_03324	0.83	+2.3
3,506,044	-		CCNA_03324	0.83	-0.6
3,506,044	-		CCNA_03324	0.83	-1.2
3,506,044	-		CCNA_03324	0.83	+0.8
3,506,044	-		CCNA_03324	0.83	+0.7
3,506,044	-		CCNA_03324	0.83	+0.3
3,506,044	-		CCNA_03324	0.83	+1.0
3,506,104	-				+0.8
3,506,138	-				+2.6
3,506,138	-				+2.4
3,506,150	-				+3.2
3,506,220	-		CCNA_03325	0.10	+3.2
3,506,251	+		CCNA_03325	0.20	-2.3
3,506,296	-		CCNA_03325	0.34	+3.0
3,506,300	+		CCNA_03325	0.35	-3.2
3,506,323	-		CCNA_03325	0.42	+3.0
3,506,335	-		CCNA_03325	0.46	+3.3
3,506,355	-		CCNA_03325	0.52	+3.3
3,506,391	-		CCNA_03325	0.63	+3.0
3,506,423	-		CCNA_03325	0.72	+2.6
3,506,438	-		CCNA_03325	0.77	+2.3
3,506,448	-		CCNA_03325	0.80	+2.6
3,506,496	+				-2.1
3,506,518	+				-1.1
3,506,650	+				+0.5
3,506,658	-				+2.7
3,506,746	+				-0.7
3,506,746	+				+0.6
3,506,750	+				+0.2
3,506,756	+				+0.2
3,506,756	+				+0.3
3,506,764	-				-0.1
3,506,764	-				+0.5
3,506,764	-				+1.1
3,506,781	+				+1.3
3,506,782	+				+0.2
3,506,802	-		CCNA_03326	0.10	+0.2
3,506,808	+		CCNA_03326	0.11	+1.4
3,506,813	-		CCNA_03326	0.11	-0.8
3,506,843	+		CCNA_03326	0.13	-0.5
3,506,863	-		CCNA_03326	0.14	+1.0
3,506,870	+		CCNA_03326	0.14	+1.5
3,506,923	-		CCNA_03326	0.17	-0.2
3,506,997	+		CCNA_03326	0.20	+1.7
3,507,007	-		CCNA_03326	0.21	+4.9
3,507,015	-		CCNA_03326	0.21	-2.0
3,507,016	-		CCNA_03326	0.21	-0.7
3,507,023	+		CCNA_03326	0.22	+1.4
3,507,023	+		CCNA_03326	0.22	+1.2
3,507,039	-		CCNA_03326	0.22	+0.4
3,507,080	+		CCNA_03326	0.25	+1.3
3,507,089	-		CCNA_03326	0.25	+1.7
3,507,102	-		CCNA_03326	0.26	-1.5
3,507,132	-		CCNA_03326	0.27	-2.0
3,507,146	+		CCNA_03326	0.28	-0.3
3,507,187	-		CCNA_03326	0.30	-1.6
3,507,195	-				+1.4
3,507,207	-		CCNA_03326	0.31	+0.7
3,507,224	+		CCNA_03326	0.32	+1.1
3,507,224	+		CCNA_03326	0.32	+0.4
3,507,224	+		CCNA_03326	0.32	+0.8
3,507,232	-		CCNA_03326	0.32	+0.8
3,507,232	-		CCNA_03326	0.32	-0.2
3,507,260	+		CCNA_03326	0.34	+3.0
3,507,260	+		CCNA_03326	0.34	-1.0
3,507,260	+		CCNA_03326	0.34	+0.4
3,507,260	+		CCNA_03326	0.34	+1.5
3,507,268	+		CCNA_03326	0.34	+0.3
3,507,268	+		CCNA_03326	0.34	+1.6
3,507,268	+		CCNA_03326	0.34	+0.7
3,507,268	+		CCNA_03326	0.34	+0.4
3,507,268	-		CCNA_03326	0.34	+1.0
3,507,268	-		CCNA_03326	0.34	+0.7
3,507,270	+		CCNA_03326	0.34	+0.5
3,507,270	+		CCNA_03326	0.34	+1.1
3,507,270	+		CCNA_03326	0.34	+1.8
3,507,270	+		CCNA_03326	0.34	+2.0
3,507,276	-		CCNA_03326	0.34	-0.8
3,507,276	-		CCNA_03326	0.34	-1.1
3,507,276	-		CCNA_03326	0.34	-1.9
3,507,276	-		CCNA_03326	0.34	+1.0
3,507,278	-		CCNA_03326	0.35	-1.0
3,507,282	+		CCNA_03326	0.35	+0.4
3,507,294	+		CCNA_03326	0.35	-0.3
3,507,315	+		CCNA_03326	0.36	+1.0
3,507,316	+		CCNA_03326	0.37	+0.1
3,507,323	-		CCNA_03326	0.37	-1.2
3,507,323	-		CCNA_03326	0.37	+0.2
3,507,325	+		CCNA_03326	0.37	+1.3
3,507,325	+		CCNA_03326	0.37	+0.2
3,507,338	+		CCNA_03326	0.38	+0.9
3,507,359	-		CCNA_03326	0.39	+0.6
3,507,383	+		CCNA_03326	0.40	+1.7
3,507,383	+		CCNA_03326	0.40	+1.4
3,507,383	+		CCNA_03326	0.40	+2.1
3,507,391	-		CCNA_03326	0.40	-2.3
3,507,391	-		CCNA_03326	0.40	-0.5
3,507,391	-		CCNA_03326	0.40	-0.2
3,507,425	-		CCNA_03326	0.42	-1.9
3,507,465	+		CCNA_03326	0.44	+1.0
3,507,465	+		CCNA_03326	0.44	+3.0
3,507,465	+		CCNA_03326	0.44	+1.8
3,507,465	+		CCNA_03326	0.44	+2.4
3,507,465	+		CCNA_03326	0.44	+1.4
3,507,475	-		CCNA_03326	0.45	-0.5
3,507,475	-		CCNA_03326	0.45	-2.1
3,507,482	+		CCNA_03326	0.45	+1.3
3,507,515	-		CCNA_03326	0.47	-0.4
3,507,520	-		CCNA_03326	0.47	-0.3
3,507,521	+		CCNA_03326	0.47	+2.0
3,507,525	-		CCNA_03326	0.47	+0.8
3,507,561	-		CCNA_03326	0.49	+0.2
3,507,562	+		CCNA_03326	0.49	+2.5
3,507,564	+		CCNA_03326	0.49	+1.9
3,507,574	-		CCNA_03326	0.50	-2.1
3,507,576	+		CCNA_03326	0.50	+0.3
3,507,584	-		CCNA_03326	0.50	-1.8
3,507,597	-		CCNA_03326	0.51	-0.3
3,507,597	-		CCNA_03326	0.51	-1.1
3,507,597	-		CCNA_03326	0.51	-2.7
3,507,597	-		CCNA_03326	0.51	-1.9
3,507,599	+		CCNA_03326	0.51	+3.6
3,507,599	+		CCNA_03326	0.51	+2.0
3,507,599	+		CCNA_03326	0.51	+0.8
3,507,599	+		CCNA_03326	0.51	+1.1
3,507,607	-		CCNA_03326	0.51	+1.4
3,507,607	-		CCNA_03326	0.51	+1.0
3,507,607	-		CCNA_03326	0.51	-1.5
3,507,607	-		CCNA_03326	0.51	-2.4
3,507,607	-		CCNA_03326	0.51	+0.2
3,507,680	-		CCNA_03326	0.55	+1.1
3,507,698	+		CCNA_03326	0.56	-0.6
3,507,704	+		CCNA_03326	0.56	+1.8
3,507,705	+		CCNA_03326	0.56	+1.0
3,507,706	-		CCNA_03326	0.56	+0.5
3,507,713	-		CCNA_03326	0.57	+1.4
3,507,727	-		CCNA_03326	0.57	-1.3
3,507,738	+		CCNA_03326	0.58	+1.4
3,507,738	+		CCNA_03326	0.58	+1.7
3,507,744	+		CCNA_03326	0.58	+2.1
3,507,746	-		CCNA_03326	0.58	-1.7
3,507,785	+		CCNA_03326	0.60	+1.1
3,507,788	-		CCNA_03326	0.60	+0.4
3,507,796	+		CCNA_03326	0.61	-1.3
3,507,816	+		CCNA_03326	0.62	+0.1
3,507,827	+		CCNA_03326	0.62	+2.3
3,507,852	+		CCNA_03326	0.64	+0.9
3,507,857	+		CCNA_03326	0.64	+1.0
3,507,862	+		CCNA_03326	0.64	+0.7
3,507,862	+		CCNA_03326	0.64	+1.3
3,507,862	+		CCNA_03326	0.64	+0.7
3,507,862	+		CCNA_03326	0.64	+1.8
3,507,870	-		CCNA_03326	0.65	-0.0
3,507,978	-		CCNA_03326	0.70	+0.3
3,507,979	+		CCNA_03326	0.70	-0.0
3,507,984	+		CCNA_03326	0.70	+1.7
3,507,987	-		CCNA_03326	0.71	+0.6
3,507,990	+		CCNA_03326	0.71	+1.5
3,508,041	+		CCNA_03326	0.73	-1.4
3,508,041	+		CCNA_03326	0.73	+0.4
3,508,062	+		CCNA_03326	0.74	+0.3
3,508,070	-		CCNA_03326	0.75	-0.5
3,508,082	+		CCNA_03326	0.75	+0.8
3,508,090	-		CCNA_03326	0.76	-2.3
3,508,107	-		CCNA_03326	0.77	+0.2
3,508,123	+		CCNA_03326	0.77	-0.5
3,508,199	-		CCNA_03326	0.81	-2.1
3,508,207	-		CCNA_03326	0.82	+0.9
3,508,260	-		CCNA_03326	0.84	-2.0
3,508,270	-		CCNA_03326	0.85	-0.4
3,508,282	+		CCNA_03326	0.85	-0.3
3,508,352	+		CCNA_03326	0.89	+2.7
3,508,360	-		CCNA_03326	0.89	-2.4
3,508,360	-		CCNA_03326	0.89	+0.5
3,508,392	+				+1.3
3,508,407	+				-0.1
3,508,433	+				+0.7
3,508,441	-				-0.9
3,508,441	-				-0.4
3,508,457	+				+0.2
3,508,457	-				-1.2
3,508,492	+				+0.3
3,508,500	-				+1.8
3,508,520	-				-0.0
3,508,571	-				-1.4
3,508,571	-				-2.0
3,508,587	+				-0.2
3,508,611	-				+1.4
3,508,615	+				-0.6
3,508,615	+				+0.6
3,508,615	+				-0.6
3,508,615	+				-0.6
3,508,615	+				-0.0
3,508,615	+				-0.4
3,508,615	+				+2.0
3,508,615	+				-0.7
3,508,623	-				-1.9
3,508,623	-				-1.0
3,508,623	-				+0.6
3,508,623	-				-1.2
3,508,625	+				-1.7
3,508,651	+				+2.1
3,508,682	-				-1.2
3,508,692	-				-0.2
3,508,703	-				-2.0
3,508,772	+		CCNA_03327	0.18	+0.3
3,508,780	-		CCNA_03327	0.20	-0.7
3,508,795	+		CCNA_03327	0.24	+1.6
3,508,796	+		CCNA_03327	0.25	+0.4
3,508,796	+		CCNA_03327	0.25	-0.2
3,508,804	-		CCNA_03327	0.27	+2.6
3,508,804	-		CCNA_03327	0.27	+1.6
3,508,806	+		CCNA_03327	0.27	+0.2
3,508,809	-		CCNA_03327	0.28	-0.2
3,508,814	-		CCNA_03327	0.30	-0.0
3,508,832	-		CCNA_03327	0.34	+0.8
3,508,834	+		CCNA_03327	0.35	-0.4
3,508,834	+		CCNA_03327	0.35	+1.9
3,508,899	+		CCNA_03327	0.53	+1.9
3,508,899	+		CCNA_03327	0.53	+1.3
3,508,899	+		CCNA_03327	0.53	+0.6
3,508,907	-		CCNA_03327	0.55	+0.4
3,508,925	+		CCNA_03327	0.60	+0.1
3,508,940	-		CCNA_03327	0.64	+1.1
3,508,943	-		CCNA_03327	0.65	+0.2
3,508,979	+		CCNA_03327	0.75	+0.8
3,508,992	-		CCNA_03327	0.78	+0.4
3,509,021	+		CCNA_03327	0.86	+1.9
3,509,029	-		CCNA_03327	0.88	+0.4
3,509,033	+		CCNA_03327	0.89	+1.4
3,509,111	+				+0.7
3,509,119	+				+0.7
3,509,119	+				+1.0
3,509,121	-				+2.4
3,509,127	-				+2.0
3,509,193	-		CCNA_03328	0.14	+0.8
3,509,198	-		CCNA_03328	0.14	-0.5
3,509,198	-		CCNA_03328	0.14	-0.2
3,509,208	-		CCNA_03328	0.16	+1.0
3,509,218	-		CCNA_03328	0.17	+0.9
3,509,348	-		CCNA_03328	0.33	+1.1
3,509,363	+		CCNA_03328	0.34	+2.3
3,509,363	+		CCNA_03328	0.34	-0.7
3,509,363	+		CCNA_03328	0.34	-0.3
3,509,368	+		CCNA_03328	0.35	-1.1
3,509,368	+		CCNA_03328	0.35	-0.5
3,509,371	-		CCNA_03328	0.35	+1.2
3,509,373	+		CCNA_03328	0.36	-0.9
3,509,376	-		CCNA_03328	0.36	+0.7
3,509,376	-		CCNA_03328	0.36	+0.6
3,509,376	-		CCNA_03328	0.36	+0.8
3,509,376	-		CCNA_03328	0.36	+0.9
3,509,376	-		CCNA_03328	0.36	-1.3
3,509,408	-		CCNA_03328	0.40	+0.6
3,509,409	-		CCNA_03328	0.40	+1.3
3,509,439	+		CCNA_03328	0.44	+2.5
3,509,447	-		CCNA_03328	0.45	+2.7
3,509,461	+		CCNA_03328	0.46	-1.4
3,509,485	-		CCNA_03328	0.49	+0.2
3,509,485	-		CCNA_03328	0.49	+2.4
3,509,518	+		CCNA_03328	0.53	-1.7
3,509,520	+		CCNA_03328	0.53	-0.2