Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03317

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,492,019	-		CCNA_03316	0.49	-2.4
3,492,029	-		CCNA_03316	0.50	-0.0
3,492,033	+		CCNA_03316	0.50	-1.2
3,492,040	-		CCNA_03316	0.50	+0.8
3,492,056	+		CCNA_03316	0.51	-0.7
3,492,087	+		CCNA_03316	0.53	-0.3
3,492,121	-		CCNA_03316	0.55	-0.8
3,492,121	-		CCNA_03316	0.55	-0.3
3,492,161	+		CCNA_03316	0.57	+1.4
3,492,179	+		CCNA_03316	0.58	+0.1
3,492,179	+		CCNA_03316	0.58	-0.2
3,492,192	+		CCNA_03316	0.58	-1.0
3,492,192	+		CCNA_03316	0.58	+0.9
3,492,207	-		CCNA_03316	0.59	+0.1
3,492,208	-		CCNA_03316	0.59	+0.4
3,492,221	-		CCNA_03316	0.60	-0.2
3,492,267	-				+2.4
3,492,279	+		CCNA_03316	0.63	-0.4
3,492,279	+		CCNA_03316	0.63	-0.5
3,492,292	-		CCNA_03316	0.64	+0.2
3,492,328	-		CCNA_03316	0.66	-0.5
3,492,341	-		CCNA_03316	0.66	-1.8
3,492,341	-		CCNA_03316	0.66	+0.2
3,492,358	-		CCNA_03316	0.67	+2.4
3,492,392	-		CCNA_03316	0.69	-0.9
3,492,392	-		CCNA_03316	0.69	-0.3
3,492,421	-		CCNA_03316	0.71	-0.2
3,492,438	+		CCNA_03316	0.71	-0.5
3,492,443	+		CCNA_03316	0.72	+3.0
3,492,446	-		CCNA_03316	0.72	+0.1
3,492,504	+		CCNA_03316	0.75	-0.2
3,492,504	+		CCNA_03316	0.75	-0.8
3,492,512	-		CCNA_03316	0.75	-0.7
3,492,513	-		CCNA_03316	0.75	+1.4
3,492,517	-		CCNA_03316	0.76	-1.5
3,492,517	-		CCNA_03316	0.76	+1.0
3,492,522	+		CCNA_03316	0.76	+0.5
3,492,566	+		CCNA_03316	0.78	+0.5
3,492,567	-		CCNA_03316	0.78	-0.4
3,492,582	-		CCNA_03316	0.79	+0.5
3,492,584	+		CCNA_03316	0.79	-0.5
3,492,622	+		CCNA_03316	0.81	-1.0
3,492,622	+		CCNA_03316	0.81	+0.2
3,492,622	+		CCNA_03316	0.81	-0.8
3,492,622	+		CCNA_03316	0.81	-1.1
3,492,630	-		CCNA_03316	0.82	-0.2
3,492,630	-		CCNA_03316	0.82	+1.6
3,492,630	-		CCNA_03316	0.82	-1.2
3,492,641	+		CCNA_03316	0.82	-0.6
3,492,723	+		CCNA_03316	0.87	+3.0
3,492,753	+		CCNA_03316	0.88	+0.5
3,492,825	+				+0.7
3,492,833	-				+0.4
3,492,865	+				-0.1
3,492,869	+				-1.4
3,492,944	+				+1.3
3,492,944	+				+2.7
3,492,951	+				+0.9
3,492,952	-				-0.8
3,492,952	-				+1.5
3,492,952	-				-0.2
3,492,952	-				-0.3
3,492,967	-				-2.3
3,492,976	-				-0.2
3,493,027	+				+1.3
3,493,035	+				+0.4
3,493,035	+				-0.8
3,493,035	-				-1.7
3,493,049	-				-0.7
3,493,080	+				+1.4
3,493,080	+				+0.6
3,493,080	+				-0.3
3,493,080	+				-0.8
3,493,088	-				-3.3
3,493,088	-				+0.8
3,493,101	+				+0.2
3,493,109	-				-0.2
3,493,109	-				-0.6
3,493,217	+				+2.0
3,493,217	+				-0.1
3,493,217	+				-1.5
3,493,217	+				-0.2
3,493,225	-				+1.7
3,493,225	-				-1.9
3,493,239	+				-0.8
3,493,242	-				-1.0
3,493,269	-				+2.6
3,493,281	-				+0.5
3,493,305	+				+0.5
3,493,305	+				-1.3
3,493,305	+				+0.9
3,493,313	-				-0.4
3,493,313	-				+1.1
3,493,313	-				-0.2
3,493,313	-				+0.5
3,493,313	-				-0.1
3,493,326	+		CCNA_03317	0.10	-1.4
3,493,326	+		CCNA_03317	0.10	+0.2
3,493,334	-		CCNA_03317	0.10	+2.5
3,493,334	-		CCNA_03317	0.10	+0.4
3,493,367	+		CCNA_03317	0.11	-1.3
3,493,428	+		CCNA_03317	0.13	-2.3
3,493,430	+		CCNA_03317	0.13	-0.4
3,493,451	+		CCNA_03317	0.14	-1.4
3,493,456	+		CCNA_03317	0.14	-1.4
3,493,490	-		CCNA_03317	0.15	-0.3
3,493,525	+		CCNA_03317	0.16	+1.1
3,493,587	+		CCNA_03317	0.18	+0.5
3,493,603	+		CCNA_03317	0.19	-0.5
3,493,610	-		CCNA_03317	0.19	-0.9
3,493,629	+		CCNA_03317	0.19	-0.6
3,493,657	-		CCNA_03317	0.20	-0.8
3,493,657	-		CCNA_03317	0.20	-0.8
3,493,699	-		CCNA_03317	0.22	+0.4
3,493,699	-		CCNA_03317	0.22	-0.1
3,493,705	-		CCNA_03317	0.22	-1.4
3,493,736	+		CCNA_03317	0.23	-0.5
3,493,736	+		CCNA_03317	0.23	-0.6
3,493,744	-		CCNA_03317	0.23	-0.3
3,493,744	-		CCNA_03317	0.23	+0.2
3,493,744	-		CCNA_03317	0.23	-0.9
3,493,785	+		CCNA_03317	0.24	-2.3
3,493,799	+		CCNA_03317	0.25	-0.8
3,493,807	-		CCNA_03317	0.25	+1.3
3,493,808	+		CCNA_03317	0.25	+0.6
3,493,831	-		CCNA_03317	0.26	+0.3
3,493,835	+		CCNA_03317	0.26	+0.1
3,493,840	+		CCNA_03317	0.26	-2.3
3,493,845	+		CCNA_03317	0.26	-0.0
3,493,853	-		CCNA_03317	0.26	-0.5
3,493,853	-		CCNA_03317	0.26	-0.8
3,493,861	-		CCNA_03317	0.27	-1.3
3,493,866	-		CCNA_03317	0.27	-0.5
3,493,870	+		CCNA_03317	0.27	-1.0
3,493,893	+		CCNA_03317	0.28	+1.0
3,493,901	-		CCNA_03317	0.28	-1.5
3,493,916	+		CCNA_03317	0.28	-0.8
3,493,929	+		CCNA_03317	0.29	+3.4
3,493,958	+		CCNA_03317	0.30	-0.9
3,493,963	+		CCNA_03317	0.30	-2.4
3,493,963	+		CCNA_03317	0.30	-1.8
3,493,966	-		CCNA_03317	0.30	+0.3
3,493,966	-		CCNA_03317	0.30	-0.3
3,493,971	-		CCNA_03317	0.30	+1.0
3,493,971	-		CCNA_03317	0.30	-0.5
3,493,971	-		CCNA_03317	0.30	-1.6
3,493,973	+		CCNA_03317	0.30	-0.5
3,493,973	+		CCNA_03317	0.30	-4.1
3,493,983	+		CCNA_03317	0.30	-0.9
3,493,991	-		CCNA_03317	0.31	-2.0
3,493,997	+		CCNA_03317	0.31	-0.6
3,494,005	-		CCNA_03317	0.31	+0.1
3,494,005	-		CCNA_03317	0.31	-1.8
3,494,005	-		CCNA_03317	0.31	-0.0
3,494,015	+		CCNA_03317	0.31	-1.7
3,494,047	+		CCNA_03317	0.32	-2.5
3,494,075	+		CCNA_03317	0.33	-1.5
3,494,085	+		CCNA_03317	0.33	-0.3
3,494,120	-		CCNA_03317	0.35	+0.4
3,494,158	+		CCNA_03317	0.36	+0.2
3,494,176	-		CCNA_03317	0.36	-0.9
3,494,195	+		CCNA_03317	0.37	+0.9
3,494,195	+		CCNA_03317	0.37	-1.3
3,494,203	-		CCNA_03317	0.37	+0.5
3,494,217	+		CCNA_03317	0.38	+0.0
3,494,227	+		CCNA_03317	0.38	+1.3
3,494,246	-		CCNA_03317	0.38	-1.0
3,494,252	+		CCNA_03317	0.39	-0.5
3,494,260	-		CCNA_03317	0.39	-1.4
3,494,264	+		CCNA_03317	0.39	-0.3
3,494,264	+		CCNA_03317	0.39	-0.1
3,494,272	-		CCNA_03317	0.39	-0.3
3,494,290	-		CCNA_03317	0.40	-0.7
3,494,290	-		CCNA_03317	0.40	-1.4
3,494,303	+		CCNA_03317	0.40	-0.0
3,494,304	+		CCNA_03317	0.40	+0.1
3,494,311	-		CCNA_03317	0.40	-0.6
3,494,339	+		CCNA_03317	0.41	-0.1
3,494,339	+		CCNA_03317	0.41	+0.2
3,494,339	+		CCNA_03317	0.41	+0.2
3,494,339	+		CCNA_03317	0.41	+1.4
3,494,341	-		CCNA_03317	0.41	+0.2
3,494,347	-		CCNA_03317	0.42	-2.1
3,494,347	-		CCNA_03317	0.42	-1.5
3,494,358	+		CCNA_03317	0.42	-0.1
3,494,363	+		CCNA_03317	0.42	-0.7
3,494,371	-		CCNA_03317	0.42	-0.8
3,494,386	+		CCNA_03317	0.43	+0.2
3,494,414	-		CCNA_03317	0.44	-0.6
3,494,469	+		CCNA_03317	0.45	+1.7
3,494,476	-		CCNA_03317	0.45	-1.6
3,494,480	+		CCNA_03317	0.46	-0.8
3,494,505	-		CCNA_03317	0.46	-1.1
3,494,509	+		CCNA_03317	0.46	-2.1
3,494,514	+		CCNA_03317	0.47	-1.9
3,494,522	-		CCNA_03317	0.47	+0.5
3,494,522	-		CCNA_03317	0.47	-1.0
3,494,576	+		CCNA_03317	0.49	+0.4
3,494,593	+		CCNA_03317	0.49	-0.0
3,494,601	-		CCNA_03317	0.49	+0.0
3,494,621	+		CCNA_03317	0.50	+0.7
3,494,629	-		CCNA_03317	0.50	-0.4
3,494,629	-		CCNA_03317	0.50	+0.0
3,494,629	-		CCNA_03317	0.50	+0.4
3,494,677	-		CCNA_03317	0.52	-0.8
3,494,679	+		CCNA_03317	0.52	-0.4
3,494,679	+		CCNA_03317	0.52	-0.7
3,494,687	-		CCNA_03317	0.52	+1.1
3,494,687	-		CCNA_03317	0.52	-0.3
3,494,687	-		CCNA_03317	0.52	+0.8
3,494,687	-		CCNA_03317	0.52	-0.4
3,494,687	-		CCNA_03317	0.52	+1.0
3,494,687	-		CCNA_03317	0.52	+2.5
3,494,687	-		CCNA_03317	0.52	+0.4
3,494,687	-		CCNA_03317	0.52	+0.6
3,494,687	-		CCNA_03317	0.52	+1.7
3,494,707	-		CCNA_03317	0.53	-0.2
3,494,720	+		CCNA_03317	0.53	+0.8
3,494,720	-		CCNA_03317	0.53	-1.3
3,494,727	-		CCNA_03317	0.53	-1.0
3,494,768	-		CCNA_03317	0.54	-0.0
3,494,781	+		CCNA_03317	0.55	-1.7
3,494,786	+		CCNA_03317	0.55	-0.3
3,494,832	-		CCNA_03317	0.56	-0.5
3,494,868	+		CCNA_03317	0.58	-0.2
3,494,869	+		CCNA_03317	0.58	-2.5
3,494,875	+		CCNA_03317	0.58	-1.3
3,494,880	+		CCNA_03317	0.58	-0.3
3,494,880	+		CCNA_03317	0.58	+0.7
3,494,880	+		CCNA_03317	0.58	-0.7
3,494,880	+		CCNA_03317	0.58	+0.8
3,494,888	-		CCNA_03317	0.58	-2.0
3,494,888	-		CCNA_03317	0.58	-1.1
3,494,893	-		CCNA_03317	0.58	-0.8
3,494,916	+		CCNA_03317	0.59	+0.3
3,494,926	+		CCNA_03317	0.59	-0.0
3,494,934	-		CCNA_03317	0.60	-0.4
3,494,934	-		CCNA_03317	0.60	+0.7
3,495,002	-		CCNA_03317	0.62	-3.0
3,495,021	-		CCNA_03317	0.62	-0.9
3,495,059	+		CCNA_03317	0.63	-1.9
3,495,073	-		CCNA_03317	0.64	-0.9
3,495,081	+		CCNA_03317	0.64	-1.9
3,495,081	-		CCNA_03317	0.64	-0.1
3,495,081	-		CCNA_03317	0.64	+2.3
3,495,082	-		CCNA_03317	0.64	-0.5
3,495,152	+		CCNA_03317	0.66	-2.4
3,495,209	-		CCNA_03317	0.68	+0.8
3,495,209	-		CCNA_03317	0.68	-0.8
3,495,218	+		CCNA_03317	0.68	-2.3
3,495,290	+		CCNA_03317	0.71	-1.9
3,495,290	-		CCNA_03317	0.71	-1.3
3,495,298	-		CCNA_03317	0.71	+2.0
3,495,298	-		CCNA_03317	0.71	+1.0
3,495,335	-		CCNA_03317	0.72	-1.3
3,495,350	+		CCNA_03317	0.72	-0.8
3,495,365	-		CCNA_03317	0.73	-1.3
3,495,365	-		CCNA_03317	0.73	-0.0
3,495,371	-		CCNA_03317	0.73	-1.3
3,495,380	-		CCNA_03317	0.73	-1.3
3,495,390	-		CCNA_03317	0.74	-0.7
3,495,390	-		CCNA_03317	0.74	-1.0
3,495,390	-		CCNA_03317	0.74	-1.5
3,495,390	-		CCNA_03317	0.74	-1.0
3,495,390	-		CCNA_03317	0.74	-0.1
3,495,411	-		CCNA_03317	0.74	+0.2
3,495,465	+		CCNA_03317	0.76	-2.6
3,495,483	+		CCNA_03317	0.76	+0.1
3,495,507	+		CCNA_03317	0.77	-0.3
3,495,513	-		CCNA_03317	0.77	+0.4
3,495,547	-		CCNA_03317	0.78	+0.3
3,495,561	+		CCNA_03317	0.79	-2.3
3,495,569	-		CCNA_03317	0.79	-0.3
3,495,569	-		CCNA_03317	0.79	-0.7
3,495,577	-		CCNA_03317	0.79	-0.0
3,495,587	+		CCNA_03317	0.80	-1.0
3,495,595	-		CCNA_03317	0.80	-1.8
3,495,619	-		CCNA_03317	0.81	-2.9
3,495,626	-		CCNA_03317	0.81	-1.5
3,495,693	-		CCNA_03317	0.83	-1.7
3,495,734	+		CCNA_03317	0.84	-0.7
3,495,734	+		CCNA_03317	0.84	+1.4
3,495,734	+		CCNA_03317	0.84	+0.1
3,495,742	-		CCNA_03317	0.84	-0.8
3,495,742	-		CCNA_03317	0.84	-0.0
3,495,759	-		CCNA_03317	0.85	+1.6
3,495,770	+		CCNA_03317	0.85	-1.1
3,495,770	+		CCNA_03317	0.85	-1.6
3,495,770	+		CCNA_03317	0.85	-0.2
3,495,775	+		CCNA_03317	0.85	-1.8
3,495,778	-		CCNA_03317	0.86	-2.1
3,495,778	-		CCNA_03317	0.86	-0.3
3,495,778	-		CCNA_03317	0.86	-0.3
3,495,778	-		CCNA_03317	0.86	-0.3
3,495,778	-		CCNA_03317	0.86	-1.8
3,495,778	-		CCNA_03317	0.86	-0.9
3,495,792	+		CCNA_03317	0.86	-0.3
3,495,792	+		CCNA_03317	0.86	+1.1
3,495,810	+		CCNA_03317	0.87	+0.7
3,495,949	-				-1.5
3,496,014	+				-3.2
3,496,022	-				-0.9
3,496,090	+				-1.2
3,496,093	-				+0.5
3,496,105	+				+0.7
3,496,170	+				-1.7
3,496,216	+				+0.2
3,496,224	-				-2.3
3,496,229	+				-1.4
3,496,237	-				-1.6
3,496,254	+				+0.1
3,496,262	-				-1.2
3,496,303	+				-0.2
3,496,303	+				+0.5
3,496,303	+				-0.5
3,496,303	+				-2.5
3,496,303	+				-1.6
3,496,311	-				-0.6
3,496,311	-				-0.8
3,496,311	-				-2.1
3,496,311	-				-0.0
3,496,311	-				+0.1
3,496,312	-				-1.0
3,496,312	-				-0.4
3,496,312	-				-1.1
3,496,318	-				+1.0
3,496,334	-				+0.3
3,496,369	-				-0.3
3,496,384	-				+0.9
3,496,385	+				-1.5
3,496,393	-				+3.0
3,496,393	-				+0.8
3,496,441	+				-1.3
3,496,441	+				+0.2
3,496,441	+				-2.2
3,496,441	+				+1.7
3,496,441	+				-2.1
3,496,449	-				+1.2
3,496,449	-				+2.1
3,496,449	-				+0.3
3,496,449	-				+0.8
3,496,476	+				+0.4
3,496,511	-				-1.0
3,496,534	-		CCNA_03318	0.12	+0.9
3,496,550	+		CCNA_03318	0.13	-0.5
3,496,558	+		CCNA_03318	0.13	-1.5
3,496,698	-		CCNA_03318	0.24	-0.6
3,496,793	+		CCNA_03318	0.30	+0.8
3,496,809	-		CCNA_03318	0.32	-0.3
3,496,838	+		CCNA_03318	0.34	-1.4
3,496,851	-		CCNA_03318	0.35	-1.2
3,496,869	-		CCNA_03318	0.36	-0.5
3,496,905	+		CCNA_03318	0.39	-3.3
3,496,905	+		CCNA_03318	0.39	-1.3
3,496,905	+		CCNA_03318	0.39	+0.5
3,496,913	-		CCNA_03318	0.39	+0.3
3,496,945	+		CCNA_03318	0.41	-1.8
3,496,953	-		CCNA_03318	0.42	-0.5
3,496,960	+		CCNA_03318	0.43	-1.9
3,497,001	-		CCNA_03318	0.46	-0.0
3,497,031	-		CCNA_03318	0.48	+0.5
3,497,036	+		CCNA_03318	0.48	+0.2
3,497,044	-		CCNA_03318	0.49	+3.0
3,497,094	-		CCNA_03318	0.52	-0.5
3,497,098	+		CCNA_03318	0.53	-2.4
3,497,103	+		CCNA_03318	0.53	+0.2
3,497,103	+		CCNA_03318	0.53	-0.9
3,497,103	+		CCNA_03318	0.53	-0.3
3,497,106	-		CCNA_03318	0.53	-0.0
3,497,108	+		CCNA_03318	0.53	-0.8
3,497,111	-		CCNA_03318	0.54	+0.1
3,497,111	-		CCNA_03318	0.54	+1.4
3,497,111	-		CCNA_03318	0.54	-2.3
3,497,136	-		CCNA_03318	0.55	-0.5
3,497,141	+		CCNA_03318	0.56	+2.5
3,497,147	-		CCNA_03318	0.56	+0.1
3,497,177	+		CCNA_03318	0.58	+0.5
3,497,182	+		CCNA_03318	0.59	-0.9
3,497,216	-		CCNA_03318	0.61	+0.7
3,497,216	-		CCNA_03318	0.61	+0.3