Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03038

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,191,846	-		CCNA_03037	0.34	+0.8
3,191,846	-		CCNA_03037	0.34	+1.1
3,191,853	-		CCNA_03037	0.35	+0.9
3,191,956	+		CCNA_03037	0.42	-1.2
3,191,956	+		CCNA_03037	0.42	-1.7
3,191,964	-		CCNA_03037	0.42	+1.1
3,191,964	-		CCNA_03037	0.42	+0.7
3,191,979	-		CCNA_03037	0.43	+1.6
3,191,984	-		CCNA_03037	0.44	+1.8
3,191,989	-		CCNA_03037	0.44	+0.4
3,192,008	-		CCNA_03037	0.45	+0.8
3,192,035	-		CCNA_03037	0.47	+2.0
3,192,047	+		CCNA_03037	0.48	-0.8
3,192,052	+		CCNA_03037	0.48	+0.3
3,192,055	-		CCNA_03037	0.48	+1.2
3,192,065	-		CCNA_03037	0.49	+1.7
3,192,091	+		CCNA_03037	0.51	-0.7
3,192,116	-		CCNA_03037	0.52	+1.1
3,192,122	+		CCNA_03037	0.53	-1.8
3,192,127	+		CCNA_03037	0.53	-0.7
3,192,130	-		CCNA_03037	0.53	+0.6
3,192,132	+		CCNA_03037	0.53	-0.4
3,192,135	-		CCNA_03037	0.54	+0.9
3,192,171	+		CCNA_03037	0.56	-0.8
3,192,212	-		CCNA_03037	0.59	+1.0
3,192,238	-		CCNA_03037	0.60	+2.3
3,192,294	-		CCNA_03037	0.64	+1.8
3,192,318	-		CCNA_03037	0.66	+2.0
3,192,393	+		CCNA_03037	0.71	-1.6
3,192,394	-		CCNA_03037	0.71	+5.3
3,192,423	-		CCNA_03037	0.73	+1.6
3,192,455	-		CCNA_03037	0.75	+2.7
3,192,478	+		CCNA_03037	0.76	-3.2
3,192,507	-		CCNA_03037	0.78	+1.0
3,192,537	-		CCNA_03037	0.80	+1.1
3,192,539	+		CCNA_03037	0.80	-1.2
3,192,547	+		CCNA_03037	0.81	-0.4
3,192,547	-		CCNA_03037	0.81	+1.4
3,192,547	-		CCNA_03037	0.81	+0.3
3,192,549	+		CCNA_03037	0.81	-0.1
3,192,567	-		CCNA_03037	0.82	+0.5
3,192,576	-		CCNA_03037	0.83	+1.4
3,192,591	-		CCNA_03037	0.84	+1.9
3,192,596	-		CCNA_03037	0.84	+0.7
3,192,628	+		CCNA_03037	0.86	+0.6
3,192,633	+		CCNA_03037	0.87	-1.4
3,192,641	-		CCNA_03037	0.87	+1.3
3,192,641	-		CCNA_03037	0.87	+1.6
3,192,643	+		CCNA_03037	0.87	-0.2
3,192,651	-		CCNA_03037	0.88	+1.1
3,192,656	-		CCNA_03037	0.88	+0.7
3,192,713	-				+1.2
3,192,749	-				+1.6
3,192,801	+				+0.5
3,192,851	+				-1.5
3,192,859	-				+2.0
3,192,870	+				-1.4
3,192,870	+				-0.2
3,192,878	-				+2.1
3,192,915	+				-1.4
3,192,926	-				+1.4
3,192,934	+				+1.1
3,192,942	-				+1.6
3,192,942	-				+3.4
3,192,942	-				+2.8
3,192,948	-				+2.1
3,192,952	+				-1.1
3,192,970	-				+1.3
3,192,971	-				+1.5
3,193,016	-		CCNA_03038	0.12	+0.5
3,193,016	-		CCNA_03038	0.12	+0.3
3,193,021	-		CCNA_03038	0.12	+1.5
3,193,092	+		CCNA_03038	0.17	-1.9
3,193,092	+		CCNA_03038	0.17	-0.9
3,193,092	+		CCNA_03038	0.17	-1.7
3,193,100	-		CCNA_03038	0.17	+2.1
3,193,100	-		CCNA_03038	0.17	+1.9
3,193,132	+		CCNA_03038	0.19	-2.3
3,193,132	+		CCNA_03038	0.19	-0.0
3,193,137	+		CCNA_03038	0.19	+0.4
3,193,140	-		CCNA_03038	0.20	+1.7
3,193,140	-		CCNA_03038	0.20	+2.3
3,193,140	-		CCNA_03038	0.20	+1.4
3,193,140	-		CCNA_03038	0.20	+1.6
3,193,140	-		CCNA_03038	0.20	+1.6
3,193,150	-		CCNA_03038	0.20	+0.4
3,193,160	-		CCNA_03038	0.21	+2.3
3,193,178	+		CCNA_03038	0.22	+2.2
3,193,183	+		CCNA_03038	0.22	-2.1
3,193,186	-		CCNA_03038	0.23	+2.6
3,193,186	-		CCNA_03038	0.23	+1.7
3,193,186	-		CCNA_03038	0.23	+1.4
3,193,186	-		CCNA_03038	0.23	+2.0
3,193,186	-		CCNA_03038	0.23	+1.6
3,193,204	-		CCNA_03038	0.24	+1.8
3,193,213	-		CCNA_03038	0.24	+1.6
3,193,228	-		CCNA_03038	0.25	+3.1
3,193,230	+		CCNA_03038	0.25	-2.2
3,193,248	-		CCNA_03038	0.27	+1.3
3,193,257	+		CCNA_03038	0.27	-0.2
3,193,257	+		CCNA_03038	0.27	+0.6
3,193,265	-		CCNA_03038	0.28	+1.8
3,193,265	-		CCNA_03038	0.28	+2.7
3,193,265	-		CCNA_03038	0.28	+1.4
3,193,265	-		CCNA_03038	0.28	+2.1
3,193,274	+		CCNA_03038	0.28	-0.6
3,193,282	+		CCNA_03038	0.29	+1.4
3,193,287	-		CCNA_03038	0.29	+1.6
3,193,311	-		CCNA_03038	0.31	+1.5
3,193,383	+		CCNA_03038	0.35	-0.5
3,193,386	-		CCNA_03038	0.36	+1.4
3,193,414	-		CCNA_03038	0.37	+2.0
3,193,430	+		CCNA_03038	0.38	-0.4
3,193,434	-		CCNA_03038	0.39	+2.2
3,193,450	+		CCNA_03038	0.40	+0.3
3,193,466	+		CCNA_03038	0.41	+0.4
3,193,469	-		CCNA_03038	0.41	+2.2
3,193,494	+		CCNA_03038	0.42	-0.9
3,193,499	+		CCNA_03038	0.43	+2.3
3,193,502	-		CCNA_03038	0.43	+2.0
3,193,507	-		CCNA_03038	0.43	+2.0
3,193,548	-		CCNA_03038	0.46	+1.4
3,193,548	-		CCNA_03038	0.46	+0.4
3,193,548	-		CCNA_03038	0.46	+2.9
3,193,571	-		CCNA_03038	0.47	+2.0
3,193,582	+		CCNA_03038	0.48	-1.5
3,193,601	-		CCNA_03038	0.49	+2.8
3,193,632	+		CCNA_03038	0.51	-1.7
3,193,641	+		CCNA_03038	0.52	+1.1
3,193,668	-		CCNA_03038	0.54	+1.8
3,193,677	-		CCNA_03038	0.54	+2.4
3,193,678	+		CCNA_03038	0.54	+0.8
3,193,701	-		CCNA_03038	0.56	+0.1
3,193,724	+		CCNA_03038	0.57	+0.5
3,193,724	-		CCNA_03038	0.57	+1.2
3,193,749	+		CCNA_03038	0.59	+1.4
3,193,749	+		CCNA_03038	0.59	-1.5
3,193,769	+		CCNA_03038	0.60	-0.5
3,193,777	-		CCNA_03038	0.61	+2.4
3,193,788	+		CCNA_03038	0.61	+1.4
3,193,788	+		CCNA_03038	0.61	-1.5
3,193,811	+		CCNA_03038	0.63	+1.1
3,193,841	-		CCNA_03038	0.65	+1.3
3,193,846	+		CCNA_03038	0.65	+0.1
3,193,880	-		CCNA_03038	0.67	+1.6
3,193,892	-		CCNA_03038	0.68	+2.0
3,193,948	+				+2.0
3,193,965	-		CCNA_03038	0.73	+2.2
3,193,967	+		CCNA_03038	0.73	+1.1
3,194,028	+		CCNA_03038	0.77	-0.3
3,194,069	-		CCNA_03038	0.79	+2.1
3,194,069	-		CCNA_03038	0.79	+2.0
3,194,111	+		CCNA_03038	0.82	-0.1
3,194,119	-		CCNA_03038	0.83	+2.1
3,194,125	-		CCNA_03038	0.83	+1.8
3,194,168	-		CCNA_03038	0.86	+2.1
3,194,294	+				+0.6
3,194,326	+				-0.2
3,194,351	+				+0.8
3,194,354	-				+1.6
3,194,405	-				+3.8
3,194,412	+				-1.5
3,194,412	+				-0.8
3,194,420	-				+0.8
3,194,459	+		CCNA_03039	0.11	-2.8
3,194,470	+		CCNA_03039	0.12	+2.0
3,194,473	+		CCNA_03039	0.13	-0.6
3,194,494	+		CCNA_03039	0.16	-0.0
3,194,519	+		CCNA_03039	0.19	+0.7
3,194,525	-		CCNA_03039	0.20	+0.8
3,194,543	-				+5.3
3,194,543	-		CCNA_03039	0.23	+1.5
3,194,592	+		CCNA_03039	0.30	-1.6
3,194,592	+		CCNA_03039	0.30	-1.0
3,194,600	-		CCNA_03039	0.31	+1.9
3,194,683	-		CCNA_03039	0.44	+1.8
3,194,686	+		CCNA_03039	0.44	+0.6
3,194,728	+		CCNA_03039	0.50	-1.4
3,194,777	-		CCNA_03039	0.58	+1.9
3,194,786	+		CCNA_03039	0.59	+0.4
3,194,792	-		CCNA_03039	0.60	+1.9
3,194,792	-		CCNA_03039	0.60	+2.1
3,194,798	+		CCNA_03039	0.61	+2.9
3,194,804	-		CCNA_03039	0.62	+1.8
3,194,813	+		CCNA_03039	0.63	-1.2
3,194,845	-		CCNA_03039	0.68	+2.3
3,194,875	+		CCNA_03039	0.72	+0.5
3,194,883	-		CCNA_03039	0.73	+1.3
3,194,908	-		CCNA_03039	0.77	+1.9
3,194,922	+		CCNA_03039	0.79	-1.1
3,194,922	+		CCNA_03039	0.79	-0.3
3,194,922	+		CCNA_03039	0.79	-1.0
3,194,924	-		CCNA_03039	0.79	+1.7
3,194,930	-		CCNA_03039	0.80	+3.9
3,194,930	-		CCNA_03039	0.80	-0.4
3,194,955	-		CCNA_03039	0.84	+2.1
3,195,004	+				-0.9
3,195,010	-				+0.6
3,195,012	-				+1.9
3,195,032	-				+2.4
3,195,039	+				-0.8
3,195,049	-				+1.6
3,195,089	+				-1.2
3,195,097	-				+2.2
3,195,135	+				-1.1
3,195,143	-				+2.0
3,195,143	-				+1.7
3,195,143	-				+2.5
3,195,161	+				-1.4
3,195,166	+				+0.1
3,195,169	-				+1.5
3,195,230	+				-1.1
3,195,329	+		CCNA_03040	0.15	-1.6
3,195,373	+		CCNA_03040	0.18	-0.6