Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02885

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,032,812	+				+0.3
3,032,812	+				-2.4
3,032,812	+				-1.9
3,032,820	-				-1.4
3,032,820	-				-1.8
3,032,856	+				-0.0
3,032,866	-				-1.0
3,032,866	-				-1.0
3,032,873	+				+0.0
3,032,873	+				-1.1
3,032,878	+				+0.6
3,032,878	+				+0.1
3,032,878	+				+0.1
3,032,886	-				-0.9
3,032,886	-				+0.8
3,032,973	+		CCNA_02884	0.15	-0.7
3,032,978	+		CCNA_02884	0.16	+0.5
3,032,978	+		CCNA_02884	0.16	-0.7
3,032,978	+		CCNA_02884	0.16	+2.4
3,032,981	-		CCNA_02884	0.16	-1.1
3,032,991	-		CCNA_02884	0.18	-0.7
3,033,041	-		CCNA_02884	0.24	-0.4
3,033,083	-		CCNA_02884	0.30	-0.3
3,033,106	+		CCNA_02884	0.33	-0.5
3,033,111	+		CCNA_02884	0.33	+0.6
3,033,111	+		CCNA_02884	0.33	-1.5
3,033,111	+		CCNA_02884	0.33	-1.9
3,033,119	-		CCNA_02884	0.34	-0.4
3,033,119	-		CCNA_02884	0.34	+0.7
3,033,119	-		CCNA_02884	0.34	+0.5
3,033,119	-		CCNA_02884	0.34	-2.6
3,033,119	-		CCNA_02884	0.34	+0.3
3,033,119	-		CCNA_02884	0.34	+0.8
3,033,215	+		CCNA_02884	0.47	-0.9
3,033,224	-		CCNA_02884	0.48	-1.0
3,033,228	+		CCNA_02884	0.49	-1.0
3,033,246	-				+3.8
3,033,256	-		CCNA_02884	0.52	+0.3
3,033,281	+		CCNA_02884	0.55	+0.5
3,033,281	+		CCNA_02884	0.55	-0.3
3,033,281	+		CCNA_02884	0.55	+0.1
3,033,299	-		CCNA_02884	0.58	-0.4
3,033,303	-		CCNA_02884	0.58	-0.8
3,033,324	-		CCNA_02884	0.61	-0.4
3,033,338	-		CCNA_02884	0.63	-1.7
3,033,395	-		CCNA_02884	0.70	-1.2
3,033,395	-		CCNA_02884	0.70	+0.6
3,033,396	+		CCNA_02884	0.70	-1.9
3,033,417	+		CCNA_02884	0.73	+0.6
3,033,425	-		CCNA_02884	0.74	-0.4
3,033,425	-		CCNA_02884	0.74	+1.3
3,033,425	-		CCNA_02884	0.74	-1.7
3,033,425	-		CCNA_02884	0.74	-0.2
3,033,425	-		CCNA_02884	0.74	+2.7
3,033,425	-		CCNA_02884	0.74	+1.8
3,033,533	-		CCNA_02884	0.88	+1.0
3,033,625	-				-2.0
3,033,640	-				+0.8
3,033,640	-				+0.5
3,033,651	+				-0.3
3,033,651	+				+4.4
3,033,752	+				+0.7
3,033,757	+				-1.8
3,033,760	-				-0.1
3,033,771	-				+2.2
3,033,785	+				-0.3
3,033,785	+				+5.0
3,033,890	-		CCNA_02885	0.22	-1.8
3,033,909	-				+2.4
3,033,920	+		CCNA_02885	0.26	-0.7
3,033,920	+		CCNA_02885	0.26	-0.5
3,033,920	+		CCNA_02885	0.26	+0.1
3,033,920	+		CCNA_02885	0.26	+0.8
3,033,920	+		CCNA_02885	0.26	+0.8
3,033,920	+		CCNA_02885	0.26	-0.9
3,033,920	+		CCNA_02885	0.26	+1.8
3,033,927	+		CCNA_02885	0.27	-0.9
3,033,928	-		CCNA_02885	0.27	-1.7
3,033,928	-		CCNA_02885	0.27	-1.7
3,033,928	-		CCNA_02885	0.27	-1.6
3,033,949	-		CCNA_02885	0.30	-1.8
3,034,037	+		CCNA_02885	0.43	+0.4
3,034,040	-		CCNA_02885	0.43	+0.3
3,034,045	+		CCNA_02885	0.44	-1.2
3,034,099	+		CCNA_02885	0.51	+0.6
3,034,107	-		CCNA_02885	0.52	-0.7
3,034,108	+		CCNA_02885	0.52	+1.2
3,034,108	+		CCNA_02885	0.52	-1.3
3,034,108	+		CCNA_02885	0.52	+0.7
3,034,116	-		CCNA_02885	0.54	-1.7
3,034,155	-		CCNA_02885	0.59	+1.2
3,034,165	-		CCNA_02885	0.60	-0.9
3,034,171	+		CCNA_02885	0.61	-1.2
3,034,179	-		CCNA_02885	0.62	+1.6
3,034,191	+		CCNA_02885	0.64	-1.7
3,034,191	+		CCNA_02885	0.64	+0.3
3,034,191	+		CCNA_02885	0.64	+1.0
3,034,191	+		CCNA_02885	0.64	-2.1
3,034,271	-		CCNA_02885	0.75	-0.6
3,034,293	-		CCNA_02885	0.78	-0.7
3,034,338	+		CCNA_02885	0.85	+0.3
3,034,367	+		CCNA_02885	0.89	+1.0
3,034,375	-		CCNA_02885	0.90	-0.4
3,034,375	-		CCNA_02885	0.90	-1.9
3,034,375	-		CCNA_02885	0.90	-0.4
3,034,382	-				-1.5
3,034,395	+				-1.4
3,034,451	-				-0.2
3,034,455	-				+0.7
3,034,474	+				+2.8
3,034,482	-				-2.2
3,034,482	-				-0.7
3,034,482	-				-2.1
3,034,487	+				+1.1
3,034,487	-				-2.8
3,034,487	-				-0.3
3,034,495	-				+0.3
3,034,496	+				-0.2
3,034,496	+				-0.6
3,034,504	-				+0.6
3,034,515	+				+1.6
3,034,515	+				+1.1
3,034,537	-				-1.2
3,034,555	+				+0.5
3,034,572	+				+0.6
3,034,580	-				+1.9
3,034,580	-				+0.8
3,034,599	+				-1.9
3,034,599	+				-2.6
3,034,607	-				-1.3
3,034,686	+		CCNA_02886	0.23	+0.4
3,034,718	-		CCNA_02886	0.31	+0.6
3,034,718	-		CCNA_02886	0.31	-1.0
3,034,752	-		CCNA_02886	0.40	-1.7
3,034,752	-		CCNA_02886	0.40	+0.7
3,034,752	-		CCNA_02886	0.40	+0.9
3,034,752	-		CCNA_02886	0.40	+0.6
3,034,759	+		CCNA_02886	0.42	+1.2
3,034,767	-		CCNA_02886	0.44	-0.3
3,034,782	+		CCNA_02886	0.47	-1.0
3,034,816	+		CCNA_02886	0.56	+0.6
3,034,826	+		CCNA_02886	0.59	-0.7
3,034,869	+		CCNA_02886	0.70	-1.1
3,034,877	-		CCNA_02886	0.72	-0.6
3,034,877	-		CCNA_02886	0.72	+0.3
3,034,877	-		CCNA_02886	0.72	-1.0
3,034,877	-		CCNA_02886	0.72	-1.6
3,034,991	-				-2.1
3,035,083	-				+3.6
3,035,083	-				+0.8
3,035,133	-				+0.6
3,035,164	+				-0.8
3,035,180	+				+1.7
3,035,188	-				+0.7
3,035,206	+				+0.1
3,035,206	+				-0.4
3,035,206	+				-0.4
3,035,206	+				+1.2
3,035,206	+				-2.1
3,035,230	+				-1.4
3,035,259	-				+0.8
3,035,261	+				-1.2
3,035,292	-				+1.5
3,035,309	+		CCNA_02887	0.11	-1.0
3,035,309	+		CCNA_02887	0.11	+0.7
3,035,309	+		CCNA_02887	0.11	+0.9
3,035,312	-		CCNA_02887	0.12	-0.4
3,035,312	-		CCNA_02887	0.12	+0.1
3,035,317	-		CCNA_02887	0.12	+0.5
3,035,319	+		CCNA_02887	0.13	+0.1
3,035,329	+		CCNA_02887	0.14	+0.9
3,035,329	+		CCNA_02887	0.14	-0.4
3,035,337	-		CCNA_02887	0.15	+2.5
3,035,352	+		CCNA_02887	0.17	-1.7
3,035,352	-		CCNA_02887	0.17	+0.9
3,035,357	+		CCNA_02887	0.17	-1.6
3,035,360	-		CCNA_02887	0.18	+0.9
3,035,372	+		CCNA_02887	0.19	+0.9
3,035,375	-		CCNA_02887	0.20	+0.5
3,035,379	+		CCNA_02887	0.20	+0.9
3,035,379	+		CCNA_02887	0.20	+1.4
3,035,379	+		CCNA_02887	0.20	+2.9
3,035,379	+		CCNA_02887	0.20	-1.2
3,035,379	+		CCNA_02887	0.20	+0.8
3,035,379	+		CCNA_02887	0.20	+0.3
3,035,379	+		CCNA_02887	0.20	-1.3
3,035,387	-		CCNA_02887	0.21	-1.4
3,035,387	-		CCNA_02887	0.21	-1.2
3,035,387	-		CCNA_02887	0.21	-0.9
3,035,387	-		CCNA_02887	0.21	-0.1
3,035,387	-		CCNA_02887	0.21	-0.6
3,035,387	-		CCNA_02887	0.21	-2.7
3,035,387	-		CCNA_02887	0.21	-1.0
3,035,387	-		CCNA_02887	0.21	-0.6
3,035,387	-		CCNA_02887	0.21	+1.9
3,035,399	+		CCNA_02887	0.23	+1.5
3,035,400	+		CCNA_02887	0.23	-1.0
3,035,407	-		CCNA_02887	0.24	-1.6
3,035,417	-		CCNA_02887	0.25	-0.1
3,035,433	-		CCNA_02887	0.27	-0.7
3,035,447	+		CCNA_02887	0.29	-0.1