Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02403

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,545,426	+		CCNA_02402	0.53	+0.1
2,545,465	+		CCNA_02402	0.56	+0.1
2,545,470	+		CCNA_02402	0.56	-1.5
2,545,470	+		CCNA_02402	0.56	+0.2
2,545,475	+		CCNA_02402	0.56	+0.8
2,545,475	+		CCNA_02402	0.56	-1.0
2,545,483	-		CCNA_02402	0.57	+0.6
2,545,483	-		CCNA_02402	0.57	+0.5
2,545,483	-		CCNA_02402	0.57	+1.8
2,545,485	+		CCNA_02402	0.57	-2.6
2,545,504	-		CCNA_02402	0.58	+0.9
2,545,515	-		CCNA_02402	0.59	+1.0
2,545,529	+		CCNA_02402	0.60	-2.0
2,545,529	+		CCNA_02402	0.60	-0.3
2,545,537	-		CCNA_02402	0.60	+1.4
2,545,537	-		CCNA_02402	0.60	+1.9
2,545,537	-		CCNA_02402	0.60	+1.8
2,545,578	+		CCNA_02402	0.63	+1.7
2,545,586	+		CCNA_02402	0.63	+0.0
2,545,586	+		CCNA_02402	0.63	-1.8
2,545,594	-		CCNA_02402	0.64	+1.1
2,545,594	-		CCNA_02402	0.64	+2.8
2,545,594	-				+6.5
2,545,594	-		CCNA_02402	0.64	+1.4
2,545,594	-		CCNA_02402	0.64	-0.2
2,545,594	-		CCNA_02402	0.64	+2.1
2,545,594	-		CCNA_02402	0.64	+2.2
2,545,594	-		CCNA_02402	0.64	+0.8
2,545,633	+		CCNA_02402	0.66	-2.1
2,545,639	-		CCNA_02402	0.67	+2.3
2,545,641	-		CCNA_02402	0.67	+2.2
2,545,641	-		CCNA_02402	0.67	+1.3
2,545,641	-		CCNA_02402	0.67	+1.5
2,545,672	+		CCNA_02402	0.69	+0.7
2,545,675	-		CCNA_02402	0.69	+1.1
2,545,680	-		CCNA_02402	0.69	+0.9
2,545,686	+		CCNA_02402	0.70	-0.3
2,545,694	-		CCNA_02402	0.70	+2.0
2,545,694	-		CCNA_02402	0.70	+0.5
2,545,706	+		CCNA_02402	0.71	-1.5
2,545,714	-		CCNA_02402	0.72	+1.1
2,545,714	-		CCNA_02402	0.72	+1.4
2,545,714	-		CCNA_02402	0.72	+3.6
2,545,714	-		CCNA_02402	0.72	+2.6
2,545,714	-		CCNA_02402	0.72	+0.3
2,545,714	-		CCNA_02402	0.72	+0.8
2,545,727	+		CCNA_02402	0.72	-0.4
2,545,757	+		CCNA_02402	0.74	+1.6
2,545,765	-		CCNA_02402	0.75	-0.2
2,545,767	-		CCNA_02402	0.75	+0.4
2,545,769	+		CCNA_02402	0.75	-1.2
2,545,777	-		CCNA_02402	0.76	+1.6
2,545,777	-		CCNA_02402	0.76	+1.9
2,545,777	-		CCNA_02402	0.76	+1.5
2,545,808	-		CCNA_02402	0.78	+1.5
2,546,003	+				-1.6
2,546,013	-				+1.4
2,546,029	-				+1.5
2,546,032	+				-2.1
2,546,032	+				+0.1
2,546,050	-				+2.4
2,546,100	+				-2.8
2,546,108	-				+2.3
2,546,117	+				-0.4
2,546,118	-				+0.9
2,546,132	+				-1.1
2,546,132	+				-2.9
2,546,132	+				+0.7
2,546,135	-				+1.5
2,546,140	-				+1.4
2,546,140	-				-0.1
2,546,160	+				-1.7
2,546,197	-				-0.9
2,546,256	-				-0.9
2,546,258	+				-0.5
2,546,275	+				+0.1
2,546,280	+				-1.5
2,546,288	-				-0.7
2,546,288	-				-0.8
2,546,312	+				-0.8
2,546,321	-				-0.2
2,546,335	+				-0.1
2,546,389	-				-0.7
2,546,401	+				+1.6
2,546,401	+				+0.4
2,546,401	+				-0.2
2,546,409	-				-2.2
2,546,409	-				-1.3
2,546,431	+				+1.3
2,546,436	+				-0.0
2,546,439	-				-1.0
2,546,452	+				+0.3
2,546,460	-				-3.1
2,546,491	-		CCNA_02403	0.11	-0.2
2,546,575	-		CCNA_02403	0.19	-3.1
2,546,611	+		CCNA_02403	0.22	+1.4
2,546,611	+		CCNA_02403	0.22	-0.9
2,546,657	+		CCNA_02403	0.26	-1.4
2,546,658	-		CCNA_02403	0.26	+0.1
2,546,691	-		CCNA_02403	0.29	-1.7
2,546,736	-		CCNA_02403	0.33	-0.3
2,546,746	-		CCNA_02403	0.34	-2.6
2,546,796	+		CCNA_02403	0.39	-0.3
2,546,808	+		CCNA_02403	0.40	-0.6
2,546,826	+		CCNA_02403	0.41	-1.1
2,546,826	+		CCNA_02403	0.41	-0.0
2,546,826	+		CCNA_02403	0.41	-1.8
2,546,834	+		CCNA_02403	0.42	-1.4
2,546,834	-		CCNA_02403	0.42	-1.2
2,546,834	-		CCNA_02403	0.42	-0.5
2,546,834	-		CCNA_02403	0.42	+1.0
2,546,834	-		CCNA_02403	0.42	-0.8
2,546,844	+		CCNA_02403	0.43	-0.1
2,546,895	+		CCNA_02403	0.47	-0.1
2,546,919	+		CCNA_02403	0.50	-0.0
2,546,947	+		CCNA_02403	0.52	-2.5
2,546,947	+		CCNA_02403	0.52	-1.3
2,546,947	+		CCNA_02403	0.52	+0.7
2,546,947	+		CCNA_02403	0.52	+1.0
2,546,947	+		CCNA_02403	0.52	-0.5
2,546,955	-		CCNA_02403	0.53	-2.6
2,546,955	-		CCNA_02403	0.53	+0.5
2,547,006	+		CCNA_02403	0.57	-1.4
2,547,014	-		CCNA_02403	0.58	-1.5
2,547,094	+		CCNA_02403	0.65	+0.6
2,547,094	+		CCNA_02403	0.65	-2.1
2,547,097	-		CCNA_02403	0.66	-1.5
2,547,102	-		CCNA_02403	0.66	-0.5
2,547,102	-		CCNA_02403	0.66	-0.8
2,547,110	-		CCNA_02403	0.67	-0.3
2,547,111	+		CCNA_02403	0.67	-0.2
2,547,148	+		CCNA_02403	0.70	+0.4
2,547,156	-		CCNA_02403	0.71	-0.9
2,547,156	-		CCNA_02403	0.71	-0.2
2,547,172	-		CCNA_02403	0.72	+1.1
2,547,172	-		CCNA_02403	0.72	-0.8
2,547,225	+		CCNA_02403	0.77	-0.8
2,547,225	+		CCNA_02403	0.77	-0.4
2,547,232	-		CCNA_02403	0.78	+1.3
2,547,233	-		CCNA_02403	0.78	-1.6
2,547,233	-		CCNA_02403	0.78	+2.3
2,547,296	+		CCNA_02403	0.83	-1.6
2,547,304	-		CCNA_02403	0.84	-1.1
2,547,309	-		CCNA_02403	0.84	-1.3
2,547,309	-		CCNA_02403	0.84	-2.3
2,547,318	+		CCNA_02403	0.85	-1.8
2,547,352	+		CCNA_02403	0.88	-0.4
2,547,353	+		CCNA_02403	0.88	-0.1
2,547,355	-		CCNA_02403	0.89	+1.5
2,547,362	-		CCNA_02403	0.89	-1.8
2,547,457	+				+0.1
2,547,462	+				+0.7
2,547,465	-				-1.0
2,547,467	+				+0.4
2,547,467	+				+0.7
2,547,470	-				-1.9
2,547,475	+				+3.0
2,547,475	-				-2.2
2,547,480	-				-1.1
2,547,509	-				-0.3
2,547,544	+				-0.6
2,547,551	+				-0.5
2,547,612	-		CCNA_02404	0.16	-1.1
2,547,621	-		CCNA_02404	0.17	-2.2
2,547,638	+		CCNA_02404	0.19	+0.8
2,547,638	+		CCNA_02404	0.19	+0.6
2,547,646	-		CCNA_02404	0.20	+0.9
2,547,646	-		CCNA_02404	0.20	+2.1
2,547,646	-		CCNA_02404	0.20	+0.6
2,547,646	-		CCNA_02404	0.20	+0.1
2,547,656	-		CCNA_02404	0.21	+0.4
2,547,661	-		CCNA_02404	0.22	-0.3
2,547,663	+		CCNA_02404	0.22	-1.8
2,547,682	-		CCNA_02404	0.24	-1.4
2,547,687	-		CCNA_02404	0.25	-2.2
2,547,768	+		CCNA_02404	0.35	-0.6
2,547,768	+		CCNA_02404	0.35	-0.6
2,547,776	-		CCNA_02404	0.36	-0.7
2,547,776	-		CCNA_02404	0.36	-1.6
2,547,776	-		CCNA_02404	0.36	-0.2
2,547,776	-		CCNA_02404	0.36	-1.4
2,547,809	+		CCNA_02404	0.40	-1.2
2,547,811	-		CCNA_02404	0.40	+1.3
2,547,817	-		CCNA_02404	0.41	-1.7
2,547,817	-		CCNA_02404	0.41	-0.0
2,547,840	+		CCNA_02404	0.43	-0.0
2,547,849	-		CCNA_02404	0.44	+0.0
2,547,889	+		CCNA_02404	0.49	-1.0
2,547,914	-		CCNA_02404	0.52	-0.5
2,547,940	-		CCNA_02404	0.55	-0.9
2,547,949	-		CCNA_02404	0.56	-0.6
2,547,976	+		CCNA_02404	0.59	-0.8
2,547,976	+		CCNA_02404	0.59	+2.4
2,547,976	+		CCNA_02404	0.59	-0.0
2,547,978	-		CCNA_02404	0.60	+1.3
2,547,984	-		CCNA_02404	0.60	+0.5
2,547,984	-		CCNA_02404	0.60	-0.5
2,548,037	+		CCNA_02404	0.67	+0.9
2,548,037	+		CCNA_02404	0.67	+1.7
2,548,037	+		CCNA_02404	0.67	+0.6
2,548,037	+		CCNA_02404	0.67	+1.0
2,548,045	-		CCNA_02404	0.68	-1.0
2,548,045	-		CCNA_02404	0.68	-1.9
2,548,055	-		CCNA_02404	0.69	-0.2
2,548,121	+		CCNA_02404	0.77	+0.1
2,548,121	+		CCNA_02404	0.77	-0.6
2,548,121	+		CCNA_02404	0.77	-0.9
2,548,129	-		CCNA_02404	0.78	-1.1
2,548,129	-		CCNA_02404	0.78	-0.4
2,548,137	+		CCNA_02404	0.79	+1.7
2,548,182	+		CCNA_02404	0.84	+0.7
2,548,190	+		CCNA_02404	0.85	+1.1
2,548,198	-		CCNA_02404	0.86	-0.7
2,548,232	+				-0.3
2,548,247	+				-0.2
2,548,250	-				+0.5
2,548,296	+				+1.2
2,548,340	+				+0.3
2,548,348	-				-1.7
2,548,348	-				-0.4
2,548,362	+				+3.7
2,548,364	+				-0.0
2,548,364	+				+0.8
2,548,372	-				-2.1
2,548,372	-				-2.7
2,548,372	-				-0.4
2,548,372	-				-0.3
2,548,372	-				-1.4
2,548,379	-				+0.2
2,548,379	-				-0.6
2,548,410	-		CCNA_02405	0.10	+0.7
2,548,428	+		CCNA_02405	0.12	-0.6
2,548,462	+		CCNA_02405	0.16	+1.6
2,548,466	+		CCNA_02405	0.16	-0.1
2,548,470	-		CCNA_02405	0.17	-1.2