Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02371

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,516,122	+		CCNA_02370	0.72	-0.2
2,516,150	+		CCNA_02370	0.73	-1.2
2,516,158	-		CCNA_02370	0.73	-0.2
2,516,158	-		CCNA_02370	0.73	-0.0
2,516,160	+		CCNA_02370	0.73	-0.3
2,516,175	-		CCNA_02370	0.74	-2.1
2,516,187	+		CCNA_02370	0.74	-1.4
2,516,195	-		CCNA_02370	0.74	-1.8
2,516,208	-		CCNA_02370	0.75	-1.7
2,516,223	+		CCNA_02370	0.75	-0.7
2,516,231	-		CCNA_02370	0.76	+0.6
2,516,247	-		CCNA_02370	0.76	-1.3
2,516,273	+		CCNA_02370	0.77	-1.2
2,516,273	+		CCNA_02370	0.77	-1.7
2,516,319	-		CCNA_02370	0.79	+0.5
2,516,350	+		CCNA_02370	0.80	-0.7
2,516,355	+		CCNA_02370	0.80	-1.4
2,516,436	+		CCNA_02370	0.83	-0.9
2,516,463	+		CCNA_02370	0.84	+1.0
2,516,470	+		CCNA_02370	0.84	+0.0
2,516,488	-		CCNA_02370	0.85	-2.2
2,516,490	+		CCNA_02370	0.85	-1.0
2,516,512	+		CCNA_02370	0.86	-1.1
2,516,531	-		CCNA_02370	0.86	-1.1
2,516,575	+		CCNA_02370	0.88	-1.9
2,516,575	+		CCNA_02370	0.88	-1.0
2,516,575	+		CCNA_02370	0.88	-0.4
2,516,583	-		CCNA_02370	0.88	+0.4
2,516,583	-		CCNA_02370	0.88	+0.9
2,516,583	-		CCNA_02370	0.88	+0.5
2,516,583	-		CCNA_02370	0.88	+0.4
2,516,583	-		CCNA_02370	0.88	+0.1
2,516,583	-		CCNA_02370	0.88	-0.5
2,516,585	+		CCNA_02370	0.88	-2.0
2,516,587	+		CCNA_02370	0.88	-1.3
2,516,670	+				-0.1
2,516,768	+				+0.4
2,516,788	+				-1.7
2,516,805	-				-0.5
2,516,820	-				-1.3
2,516,827	-				-0.8
2,516,829	+				+0.5
2,516,868	-				-0.2
2,516,881	-				+0.5
2,516,934	-				-0.6
2,516,938	+				-0.5
2,516,982	-				+0.0
2,516,982	-				+0.4
2,516,992	-				-1.5
2,517,060	+				-2.0
2,517,060	+				+0.3
2,517,060	+				-0.5
2,517,060	+				-1.6
2,517,063	+				-1.8
2,517,068	-				-0.7
2,517,068	-				-1.8
2,517,113	+				-2.1
2,517,114	-				+2.6
2,517,161	-				-0.7
2,517,161	-				+0.3
2,517,163	+				-1.5
2,517,163	+				-2.3
2,517,163	+				-0.5
2,517,166	-				-3.0
2,517,171	-				-0.2
2,517,174	+				-1.8
2,517,174	+				-0.2
2,517,174	+				-1.0
2,517,174	+				+0.1
2,517,182	-				-0.6
2,517,182	-				+0.3
2,517,198	+				-0.0
2,517,207	+				-1.2
2,517,227	+				+1.7
2,517,276	+		CCNA_02371	0.12	-1.3
2,517,291	+		CCNA_02371	0.13	+2.6
2,517,328	+		CCNA_02371	0.16	+0.9
2,517,367	+		CCNA_02371	0.18	-1.4
2,517,367	+		CCNA_02371	0.18	-0.4
2,517,374	+		CCNA_02371	0.19	-0.4
2,517,375	-		CCNA_02371	0.19	-0.5
2,517,375	-		CCNA_02371	0.19	+0.4
2,517,381	+		CCNA_02371	0.19	-1.7
2,517,381	+		CCNA_02371	0.19	-0.4
2,517,389	-		CCNA_02371	0.20	-3.3
2,517,409	-		CCNA_02371	0.21	+0.3
2,517,409	-		CCNA_02371	0.21	-0.2
2,517,455	+		CCNA_02371	0.24	-0.2
2,517,463	-		CCNA_02371	0.24	-0.6
2,517,467	-		CCNA_02371	0.25	-0.6
2,517,519	+		CCNA_02371	0.28	+2.3
2,517,529	+		CCNA_02371	0.29	+0.2
2,517,532	-		CCNA_02371	0.29	-0.3
2,517,556	+		CCNA_02371	0.31	-1.3
2,517,571	-		CCNA_02371	0.32	-0.7
2,517,591	+		CCNA_02371	0.33	-1.6
2,517,599	-		CCNA_02371	0.33	-1.8
2,517,616	+		CCNA_02371	0.35	+1.7
2,517,617	+		CCNA_02371	0.35	-0.5
2,517,689	+		CCNA_02371	0.39	-0.6
2,517,708	+		CCNA_02371	0.41	-1.3
2,517,716	-				+0.7
2,517,717	-		CCNA_02371	0.41	-1.8
2,517,735	-		CCNA_02371	0.42	-1.0
2,517,750	+		CCNA_02371	0.43	-1.1
2,517,750	+		CCNA_02371	0.43	+0.3
2,517,773	+		CCNA_02371	0.45	-0.6
2,517,773	+		CCNA_02371	0.45	-1.2
2,517,773	+		CCNA_02371	0.45	+0.6
2,517,773	+		CCNA_02371	0.45	-1.2
2,517,773	+		CCNA_02371	0.45	-1.1
2,517,781	-		CCNA_02371	0.45	-2.5
2,517,781	-		CCNA_02371	0.45	+2.7
2,517,781	-		CCNA_02371	0.45	-1.8
2,517,781	-		CCNA_02371	0.45	-1.2
2,517,820	-		CCNA_02371	0.48	-1.5
2,517,833	+		CCNA_02371	0.49	-1.3
2,517,856	+		CCNA_02371	0.50	+2.7
2,517,856	+		CCNA_02371	0.50	+2.7
2,517,863	+		CCNA_02371	0.51	+1.0
2,517,863	+		CCNA_02371	0.51	-0.4
2,517,863	+		CCNA_02371	0.51	-0.7
2,517,863	+		CCNA_02371	0.51	-2.3
2,517,863	+		CCNA_02371	0.51	-0.6
2,517,871	-		CCNA_02371	0.51	+3.5
2,517,871	-		CCNA_02371	0.51	-0.7
2,517,889	-		CCNA_02371	0.53	-1.5
2,517,914	+		CCNA_02371	0.54	-0.3
2,517,914	-		CCNA_02371	0.54	+1.4
2,517,949	-		CCNA_02371	0.57	-0.7
2,518,024	-		CCNA_02371	0.62	+0.7
2,518,028	-		CCNA_02371	0.62	+0.4
2,518,031	-		CCNA_02371	0.62	-0.2
2,518,060	+		CCNA_02371	0.64	-0.6
2,518,091	-		CCNA_02371	0.66	+2.6
2,518,137	-		CCNA_02371	0.69	-1.0
2,518,142	-		CCNA_02371	0.69	-1.6
2,518,143	+		CCNA_02371	0.69	+1.3
2,518,147	-		CCNA_02371	0.70	-2.1
2,518,148	+		CCNA_02371	0.70	-1.6
2,518,148	+		CCNA_02371	0.70	+0.3
2,518,156	-		CCNA_02371	0.70	-0.9
2,518,185	+		CCNA_02371	0.72	+2.3
2,518,193	-		CCNA_02371	0.73	-1.6
2,518,226	+		CCNA_02371	0.75	-1.1
2,518,226	+		CCNA_02371	0.75	-1.0
2,518,234	-		CCNA_02371	0.75	-1.0
2,518,234	-		CCNA_02371	0.75	-0.5
2,518,234	-		CCNA_02371	0.75	-1.2
2,518,238	+		CCNA_02371	0.76	-0.7
2,518,264	+		CCNA_02371	0.77	-0.8
2,518,267	+		CCNA_02371	0.78	-0.9
2,518,275	-		CCNA_02371	0.78	-1.7
2,518,343	-		CCNA_02371	0.83	-0.6
2,518,343	-		CCNA_02371	0.83	-1.3
2,518,343	-		CCNA_02371	0.83	-1.6
2,518,359	+		CCNA_02371	0.84	-0.8
2,518,377	+		CCNA_02371	0.85	-0.5
2,518,399	+		CCNA_02371	0.86	+1.3
2,518,425	-		CCNA_02371	0.88	-1.9
2,518,434	+		CCNA_02371	0.89	-0.4
2,518,434	+		CCNA_02371	0.89	-0.2
2,518,448	-		CCNA_02371	0.90	-0.5
2,518,502	+				+0.3
2,518,531	-				-1.8
2,518,555	-				-1.1
2,518,595	+				-2.2
2,518,595	+				-0.6
2,518,600	+				+0.2
2,518,603	-				+0.3
2,518,605	+				-0.7
2,518,608	-				+1.8
2,518,641	+				-0.4
2,518,650	-		CCNA_02372	0.12	+0.4
2,518,678	+				+0.5
2,518,685	+		CCNA_02372	0.36	-1.6
2,518,702	+		CCNA_02372	0.48	-2.3
2,518,703	-		CCNA_02372	0.49	-0.5
2,518,768	-				-0.3
2,518,768	-				+0.6