Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02365

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,504,263	-		CCNA_02364	0.65	-0.9
2,504,350	-		CCNA_02364	0.69	-0.6
2,504,350	-		CCNA_02364	0.69	+0.5
2,504,350	-		CCNA_02364	0.69	-0.8
2,504,385	-		CCNA_02364	0.70	+1.8
2,504,405	+		CCNA_02364	0.71	-0.7
2,504,423	-		CCNA_02364	0.72	+1.2
2,504,437	+		CCNA_02364	0.73	+0.9
2,504,448	+		CCNA_02364	0.73	+1.7
2,504,492	+		CCNA_02364	0.75	+3.5
2,504,492	+		CCNA_02364	0.75	+2.7
2,504,509	-		CCNA_02364	0.76	+1.1
2,504,545	+		CCNA_02364	0.77	-1.4
2,504,569	+		CCNA_02364	0.78	-2.2
2,504,569	+		CCNA_02364	0.78	-2.5
2,504,569	+		CCNA_02364	0.78	+0.5
2,504,577	-		CCNA_02364	0.78	-0.5
2,504,612	-		CCNA_02364	0.80	+2.1
2,504,625	+		CCNA_02364	0.81	-0.6
2,504,630	+		CCNA_02364	0.81	+1.4
2,504,635	+		CCNA_02364	0.81	+2.3
2,504,654	+		CCNA_02364	0.82	-0.7
2,504,680	-		CCNA_02364	0.83	+0.6
2,504,710	-		CCNA_02364	0.84	-1.3
2,504,736	-		CCNA_02364	0.85	+1.0
2,504,773	+		CCNA_02364	0.87	-1.0
2,504,792	+		CCNA_02364	0.88	-0.4
2,504,792	+		CCNA_02364	0.88	+0.1
2,504,800	-		CCNA_02364	0.88	-0.6
2,504,804	+		CCNA_02364	0.88	+2.3
2,504,810	+		CCNA_02364	0.88	+1.0
2,504,837	-		CCNA_02364	0.90	+1.0
2,504,861	+				+0.4
2,504,893	+				-0.5
2,504,900	+				+1.9
2,504,900	+				-1.5
2,504,903	-				+2.3
2,504,908	-				-1.7
2,504,941	+				+1.5
2,504,974	+				+0.4
2,504,974	+				-0.3
2,504,975	+				-0.4
2,504,982	-				+0.6
2,504,982	-				-0.5
2,505,052	+				+1.4
2,505,081	+				+1.1
2,505,097	-				+1.6
2,505,144	-				-1.0
2,505,202	+				-0.3
2,505,242	+				-0.9
2,505,242	+				-0.0
2,505,242	+				+0.5
2,505,242	+				-1.0
2,505,242	+				-0.4
2,505,242	+				-0.4
2,505,255	-				-1.5
2,505,280	+				-0.5
2,505,288	-				+1.0
2,505,301	+				-1.2
2,505,301	+				-1.6
2,505,309	-				-0.3
2,505,309	-				-3.2
2,505,309	-				-1.3
2,505,309	-				+0.4
2,505,343	+				-0.0
2,505,344	-				+0.3
2,505,370	+				-0.4
2,505,371	+				-2.4
2,505,371	+				-1.9
2,505,371	+				-1.1
2,505,379	-				-2.1
2,505,379	-				-1.1
2,505,379	-				-0.8
2,505,381	+				-0.0
2,505,381	+				-1.2
2,505,389	-				-1.4
2,505,389	-				-0.7
2,505,420	-				-1.8
2,505,462	+		CCNA_02365	0.11	-0.4
2,505,503	-		CCNA_02365	0.13	-0.9
2,505,587	+		CCNA_02365	0.16	-1.9
2,505,587	+		CCNA_02365	0.16	-0.5
2,505,587	+		CCNA_02365	0.16	-1.2
2,505,587	+		CCNA_02365	0.16	-0.0
2,505,589	-		CCNA_02365	0.17	-2.1
2,505,595	-		CCNA_02365	0.17	-2.8
2,505,607	+		CCNA_02365	0.17	-1.1
2,505,617	-		CCNA_02365	0.18	+0.7
2,505,654	-		CCNA_02365	0.19	-1.5
2,505,680	+		CCNA_02365	0.21	-0.9
2,505,688	-		CCNA_02365	0.21	-0.9
2,505,688	-		CCNA_02365	0.21	-1.7
2,505,688	-		CCNA_02365	0.21	-1.2
2,505,758	+		CCNA_02365	0.24	-1.4
2,505,771	+		CCNA_02365	0.24	+0.1
2,505,771	+		CCNA_02365	0.24	+1.0
2,505,779	-		CCNA_02365	0.25	-2.0
2,505,779	-		CCNA_02365	0.25	-0.6
2,505,864	-		CCNA_02365	0.28	-2.0
2,505,934	-		CCNA_02365	0.31	+1.9
2,505,946	+		CCNA_02365	0.32	-1.4
2,505,954	-		CCNA_02365	0.32	-0.0
2,505,999	+		CCNA_02365	0.34	-0.5
2,506,018	+		CCNA_02365	0.35	-2.4
2,506,026	-		CCNA_02365	0.35	+1.2
2,506,071	-		CCNA_02365	0.37	-0.9
2,506,076	-		CCNA_02365	0.38	-0.7
2,506,076	-		CCNA_02365	0.38	-4.1
2,506,083	+		CCNA_02365	0.38	-1.0
2,506,127	+		CCNA_02365	0.40	-0.7
2,506,127	+		CCNA_02365	0.40	-2.1
2,506,222	+		CCNA_02365	0.44	-1.1
2,506,230	+		CCNA_02365	0.44	-2.5
2,506,231	-		CCNA_02365	0.44	+0.1
2,506,242	+		CCNA_02365	0.45	-1.4
2,506,282	-		CCNA_02365	0.47	-2.5
2,506,284	+		CCNA_02365	0.47	-0.6
2,506,325	-		CCNA_02365	0.48	+0.1
2,506,334	+		CCNA_02365	0.49	-0.7
2,506,335	-		CCNA_02365	0.49	-0.4
2,506,355	+		CCNA_02365	0.50	-1.8
2,506,368	-		CCNA_02365	0.50	-1.3
2,506,368	-		CCNA_02365	0.50	+0.9
2,506,428	+		CCNA_02365	0.53	-0.3
2,506,428	-		CCNA_02365	0.53	+1.0
2,506,471	-		CCNA_02365	0.55	-0.4
2,506,473	-		CCNA_02365	0.55	-1.2
2,506,483	-		CCNA_02365	0.55	-1.7
2,506,505	+		CCNA_02365	0.56	-1.4
2,506,513	-		CCNA_02365	0.56	-1.2
2,506,519	-		CCNA_02365	0.57	-1.5
2,506,546	+		CCNA_02365	0.58	-1.6
2,506,562	+		CCNA_02365	0.59	-1.0
2,506,595	-		CCNA_02365	0.60	-1.0
2,506,663	+		CCNA_02365	0.63	-2.3
2,506,663	+		CCNA_02365	0.63	-1.3
2,506,671	-		CCNA_02365	0.63	-3.0
2,506,671	-		CCNA_02365	0.63	-1.1
2,506,676	-		CCNA_02365	0.64	-0.9
2,506,701	-		CCNA_02365	0.65	-1.4
2,506,756	-		CCNA_02365	0.67	-1.5
2,506,793	+		CCNA_02365	0.69	-0.7
2,506,812	+		CCNA_02365	0.69	-0.7
2,506,812	+		CCNA_02365	0.69	-2.0
2,506,843	-		CCNA_02365	0.71	-1.0
2,506,875	-		CCNA_02365	0.72	-1.8
2,506,885	+		CCNA_02365	0.73	+1.0
2,506,885	+		CCNA_02365	0.73	+0.1
2,506,915	+		CCNA_02365	0.74	-3.2
2,506,936	+		CCNA_02365	0.75	+0.3
2,506,948	+		CCNA_02365	0.75	+0.0
2,506,951	-		CCNA_02365	0.75	-1.1
2,506,953	+		CCNA_02365	0.75	+0.5
2,507,039	-		CCNA_02365	0.79	-3.3
2,507,058	-		CCNA_02365	0.80	+1.3
2,507,144	+		CCNA_02365	0.84	+0.5
2,507,170	-		CCNA_02365	0.85	-0.7
2,507,273	+		CCNA_02365	0.89	-1.3
2,507,281	-		CCNA_02365	0.90	-1.4
2,507,287	-		CCNA_02365	0.90	-2.1
2,507,296	-				-0.7
2,507,300	-				-0.9
2,507,338	-				-1.8
2,507,339	+				-1.0
2,507,357	+				-1.2
2,507,393	+				-0.7
2,507,401	-				+0.5
2,507,430	-				-1.9
2,507,437	+				+0.7
2,507,445	-				+0.7
2,507,451	-				-2.0
2,507,499	-				-0.6
2,507,504	-				-1.5
2,507,504	-				-1.8
2,507,530	-				-0.8
2,507,545	-				-1.6
2,507,560	-				+0.1
2,507,560	-				-1.9
2,507,610	+				-0.7
2,507,617	+				-0.5
2,507,618	-				+0.5
2,507,618	-				-1.8
2,507,627	+				-2.5
2,507,631	+				+0.7
2,507,634	-				+1.3
2,507,635	-				-1.9
2,507,666	+				-2.0
2,507,686	-				-1.0
2,507,686	-				-2.6
2,507,732	-		CCNA_02366	0.12	-0.6
2,507,734	+		CCNA_02366	0.12	-0.9
2,507,837	+		CCNA_02366	0.19	+0.5
2,507,845	-		CCNA_02366	0.19	-0.7
2,507,847	+		CCNA_02366	0.19	-1.6
2,507,855	-		CCNA_02366	0.20	-2.3
2,507,890	+		CCNA_02366	0.22	-0.9
2,507,903	-		CCNA_02366	0.23	-0.4
2,507,903	-		CCNA_02366	0.23	-0.3
2,507,903	-		CCNA_02366	0.23	-2.4
2,507,907	+		CCNA_02366	0.23	-1.7
2,507,907	+		CCNA_02366	0.23	-0.8
2,507,915	-		CCNA_02366	0.24	-1.3
2,507,915	-		CCNA_02366	0.24	-1.0
2,507,934	+		CCNA_02366	0.25	-0.5
2,507,978	-		CCNA_02366	0.28	-0.2
2,507,988	-		CCNA_02366	0.29	-1.5
2,507,988	-		CCNA_02366	0.29	-0.5
2,508,014	-		CCNA_02366	0.30	-0.4
2,508,021	+		CCNA_02366	0.31	-0.9
2,508,030	-		CCNA_02366	0.31	-3.4
2,508,031	-		CCNA_02366	0.32	-1.8
2,508,058	-		CCNA_02366	0.33	+1.0
2,508,083	+		CCNA_02366	0.35	-2.1
2,508,108	-		CCNA_02366	0.37	-2.9
2,508,149	-		CCNA_02366	0.39	-2.5
2,508,157	-		CCNA_02366	0.40	-0.6
2,508,172	+		CCNA_02366	0.41	-1.5
2,508,190	+		CCNA_02366	0.42	-0.7
2,508,190	+		CCNA_02366	0.42	-1.1
2,508,282	+		CCNA_02366	0.48	-1.1
2,508,299	-		CCNA_02366	0.49	-2.2
2,508,307	-		CCNA_02366	0.50	-1.4
2,508,313	+		CCNA_02366	0.50	-0.3
2,508,334	-		CCNA_02366	0.52	+0.7
2,508,356	+		CCNA_02366	0.53	-1.1
2,508,384	+		CCNA_02366	0.55	-2.4
2,508,392	-		CCNA_02366	0.55	-0.8
2,508,439	-		CCNA_02366	0.59	-0.6
2,508,441	+		CCNA_02366	0.59	-0.4
2,508,441	+		CCNA_02366	0.59	-2.3
2,508,453	+		CCNA_02366	0.59	+0.3
2,508,463	+		CCNA_02366	0.60	-1.4
2,508,463	+				+1.3
2,508,463	+		CCNA_02366	0.60	+0.1
2,508,463	+		CCNA_02366	0.60	+0.5
2,508,471	-		CCNA_02366	0.61	+1.0
2,508,471	-		CCNA_02366	0.61	-2.0
2,508,473	+		CCNA_02366	0.61	-2.6
2,508,481	-		CCNA_02366	0.61	-3.5
2,508,481	-		CCNA_02366	0.61	-1.5
2,508,481	-		CCNA_02366	0.61	-2.4
2,508,490	+		CCNA_02366	0.62	-1.7
2,508,493	-		CCNA_02366	0.62	-2.1
2,508,519	-		CCNA_02366	0.64	-1.1