Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01086

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,190,325	-		CCNA_01085	0.22	+0.2
1,190,325	-		CCNA_01085	0.22	+0.4
1,190,367	-		CCNA_01085	0.26	+0.3
1,190,374	+		CCNA_01085	0.27	-2.5
1,190,382	-		CCNA_01085	0.27	-0.3
1,190,420	+		CCNA_01085	0.31	-0.8
1,190,435	+		CCNA_01085	0.33	-0.6
1,190,494	-		CCNA_01085	0.39	+0.7
1,190,519	+		CCNA_01085	0.41	-2.5
1,190,542	-		CCNA_01085	0.43	+1.4
1,190,580	-		CCNA_01085	0.47	-1.7
1,190,636	-		CCNA_01085	0.53	-0.7
1,190,636	-		CCNA_01085	0.53	-0.5
1,190,646	-		CCNA_01085	0.54	+0.6
1,190,737	-		CCNA_01085	0.63	-0.4
1,190,780	+		CCNA_01085	0.67	-2.1
1,190,831	-		CCNA_01085	0.72	+0.2
1,190,831	-		CCNA_01085	0.72	+0.4
1,190,831	-		CCNA_01085	0.72	+1.0
1,190,958	+		CCNA_01085	0.85	-0.7
1,190,966	-		CCNA_01085	0.85	+1.1
1,191,012	-				+2.0
1,191,082	-				-0.0
1,191,092	+				-0.3
1,191,096	+				+0.4
1,191,138	-				+1.4
1,191,139	-				+1.4
1,191,200	+				-1.4
1,191,218	-				+3.8
1,191,218	-				+2.1
1,191,256	+				-1.8
1,191,256	+				-4.7
1,191,267	+				-1.0
1,191,289	+				-1.2
1,191,328	-				+1.4
1,191,340	-				-0.2
1,191,340	-				+0.4
1,191,359	-				-0.3
1,191,443	-				-2.4
1,191,456	+				-0.6
1,191,457	-				-3.2
1,191,475	-				-2.1
1,191,514	+		CCNA_01086	0.12	-1.7
1,191,557	-		CCNA_01086	0.14	-1.9
1,191,615	-		CCNA_01086	0.17	-0.8
1,191,709	-		CCNA_01086	0.22	+1.0
1,191,744	+		CCNA_01086	0.24	+0.2
1,191,789	-		CCNA_01086	0.27	-1.7
1,191,836	-		CCNA_01086	0.29	-1.9
1,191,846	-		CCNA_01086	0.30	-2.5
1,191,870	-		CCNA_01086	0.31	+0.8
1,191,896	-		CCNA_01086	0.33	-1.0
1,191,916	+		CCNA_01086	0.34	-2.5
1,191,936	+		CCNA_01086	0.35	+1.0
1,192,094	+		CCNA_01086	0.44	-0.0
1,192,102	-		CCNA_01086	0.44	-1.2
1,192,102	-		CCNA_01086	0.44	-2.8
1,192,102	-		CCNA_01086	0.44	-1.9
1,192,117	-		CCNA_01086	0.45	-0.2
1,192,255	-		CCNA_01086	0.53	-1.3
1,192,316	-		CCNA_01086	0.56	-2.7
1,192,339	+		CCNA_01086	0.57	-1.7
1,192,375	-		CCNA_01086	0.59	-1.4
1,192,382	-		CCNA_01086	0.60	-0.9
1,192,423	-		CCNA_01086	0.62	-1.8
1,192,425	+		CCNA_01086	0.62	-0.3
1,192,433	-		CCNA_01086	0.62	-0.7
1,192,452	-		CCNA_01086	0.63	-2.3
1,192,552	-		CCNA_01086	0.69	-2.3
1,192,553	-		CCNA_01086	0.69	-2.2
1,192,595	+		CCNA_01086	0.71	-1.5
1,192,599	+		CCNA_01086	0.72	-2.5
1,192,600	+		CCNA_01086	0.72	-1.8
1,192,603	-		CCNA_01086	0.72	+0.2
1,192,603	-		CCNA_01086	0.72	-2.1
1,192,608	-		CCNA_01086	0.72	-1.4
1,192,611	+		CCNA_01086	0.72	-0.7
1,192,637	+		CCNA_01086	0.74	-0.0
1,192,701	+		CCNA_01086	0.77	-1.1
1,192,704	-		CCNA_01086	0.77	-3.2
1,192,709	-		CCNA_01086	0.78	-3.3
1,192,733	+		CCNA_01086	0.79	-0.7
1,192,771	-		CCNA_01086	0.81	-1.6
1,192,771	-		CCNA_01086	0.81	-0.8
1,192,796	+		CCNA_01086	0.82	+1.4
1,192,866	-		CCNA_01086	0.86	-1.3
1,192,866	-		CCNA_01086	0.86	-1.8
1,192,882	+		CCNA_01086	0.87	-1.8
1,192,933	+				-0.3
1,192,941	-				-2.5
1,192,981	-				-1.7
1,193,010	-				+1.1
1,193,069	-				-0.3
1,193,133	-				+1.7
1,193,160	+				+0.4
1,193,165	+				-1.3
1,193,190	-				-1.2
1,193,255	+				-1.3
1,193,273	+				+0.5
1,193,281	-				+0.2
1,193,281	-				-0.5
1,193,289	+				-0.4
1,193,299	+				-0.5
1,193,304	-				-0.6
1,193,310	+				+0.3
1,193,315	+				+0.6
1,193,322	-				-1.7
1,193,347	-				-1.8
1,193,353	+		CCNA_01087	0.11	+0.9
1,193,361	+		CCNA_01087	0.12	-0.4
1,193,398	+		CCNA_01087	0.17	+0.7
1,193,460	-		CCNA_01087	0.26	-1.7
1,193,478	+		CCNA_01087	0.28	+0.3
1,193,490	+		CCNA_01087	0.30	+0.7
1,193,490	+		CCNA_01087	0.30	+0.8
1,193,490	+		CCNA_01087	0.30	+0.3
1,193,490	+		CCNA_01087	0.30	+0.7
1,193,495	+		CCNA_01087	0.31	-1.7
1,193,498	-		CCNA_01087	0.31	-2.2
1,193,506	+		CCNA_01087	0.32	-0.7
1,193,506	+		CCNA_01087	0.32	+0.2
1,193,507	+		CCNA_01087	0.32	+0.5
1,193,507	+		CCNA_01087	0.32	-0.5
1,193,507	+		CCNA_01087	0.32	+1.3
1,193,515	-		CCNA_01087	0.33	-0.7
1,193,515	-		CCNA_01087	0.33	+0.3
1,193,536	-		CCNA_01087	0.36	+0.0
1,193,599	+		CCNA_01087	0.45	+0.7
1,193,605	-		CCNA_01087	0.46	+0.9
1,193,611	+		CCNA_01087	0.47	-1.7
1,193,612	+		CCNA_01087	0.47	+0.8
1,193,646	+		CCNA_01087	0.52	+0.7
1,193,646	+		CCNA_01087	0.52	+1.8
1,193,666	+		CCNA_01087	0.54	+1.8
1,193,674	-		CCNA_01087	0.56	+0.9
1,193,684	+		CCNA_01087	0.57	+0.1
1,193,689	+		CCNA_01087	0.58	+1.2
1,193,692	-		CCNA_01087	0.58	+0.2
1,193,694	+		CCNA_01087	0.58	+1.0
1,193,712	+		CCNA_01087	0.61	+0.9
1,193,720	-		CCNA_01087	0.62	-0.9
1,193,720	-		CCNA_01087	0.62	-1.2
1,193,752	-		CCNA_01087	0.66	-2.6
1,193,753	-		CCNA_01087	0.67	-0.5
1,193,773	+		CCNA_01087	0.69	+1.9
1,193,775	+		CCNA_01087	0.70	+1.5
1,193,775	+		CCNA_01087	0.70	+0.9
1,193,793	-		CCNA_01087	0.72	-0.5
1,193,832	-		CCNA_01087	0.78	-1.1
1,193,903	+		CCNA_01087	0.87	+1.0
1,193,903	+		CCNA_01087	0.87	+1.6
1,193,906	-		CCNA_01087	0.88	-2.3
1,193,906	-		CCNA_01087	0.88	-1.5
1,193,926	-				-0.5
1,193,994	-				-0.1
1,193,994	-				-1.5
1,193,996	-				-2.4
1,194,007	+				+3.0
1,194,015	-				-0.3
1,194,017	+				+1.4
1,194,017	+				+2.3
1,194,018	+				-0.2
1,194,024	-				+0.9
1,194,034	-				+1.2
1,194,039	-				+1.4
1,194,089	+		CCNA_01088	0.12	+1.2
1,194,099	+		CCNA_01088	0.13	+0.5
1,194,100	-		CCNA_01088	0.14	+1.1
1,194,112	-		CCNA_01088	0.16	+1.1