Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00084

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
88,059	-		CCNA_00083	0.62	+2.2
88,091	+		CCNA_00083	0.64	-1.3
88,099	-		CCNA_00083	0.64	+1.9
88,103	+		CCNA_00083	0.65	+0.6
88,105	+		CCNA_00083	0.65	-1.0
88,111	-		CCNA_00083	0.65	+1.2
88,129	+		CCNA_00083	0.66	-0.6
88,138	-		CCNA_00083	0.67	+2.4
88,142	-		CCNA_00083	0.67	+0.2
88,157	-		CCNA_00083	0.68	-1.2
88,219	-		CCNA_00083	0.72	-0.5
88,242	+		CCNA_00083	0.73	+1.3
88,253	+		CCNA_00083	0.74	+1.6
88,300	+		CCNA_00083	0.77	-2.1
88,300	+		CCNA_00083	0.77	-1.5
88,301	-		CCNA_00083	0.77	+1.1
88,308	-		CCNA_00083	0.77	+0.4
88,308	-		CCNA_00083	0.77	-0.0
88,310	+		CCNA_00083	0.77	-1.0
88,318	-		CCNA_00083	0.78	-1.4
88,340	-		CCNA_00083	0.79	+0.7
88,340	-		CCNA_00083	0.79	-1.4
88,354	+		CCNA_00083	0.80	+1.4
88,387	+		CCNA_00083	0.82	-1.5
88,395	-		CCNA_00083	0.82	-0.9
88,395	-		CCNA_00083	0.82	+0.2
88,409	+		CCNA_00083	0.83	-1.7
88,409	+		CCNA_00083	0.83	-3.0
88,419	+		CCNA_00083	0.84	+0.2
88,419	+		CCNA_00083	0.84	-0.9
88,419	+		CCNA_00083	0.84	-1.5
88,419	+		CCNA_00083	0.84	+0.8
88,419	+		CCNA_00083	0.84	+1.3
88,427	-		CCNA_00083	0.84	+0.5
88,427	-		CCNA_00083	0.84	+0.2
88,427	-		CCNA_00083	0.84	+0.1
88,454	+		CCNA_00083	0.86	+0.5
88,462	-		CCNA_00083	0.86	-1.3
88,462	-		CCNA_00083	0.86	+1.0
88,507	-		CCNA_00083	0.89	-0.9
88,528	+				-0.6
88,528	+				+0.0
88,534	-				-0.1
88,536	-				-0.5
88,541	-				-0.2
88,556	+				-1.9
88,580	+				-0.2
88,580	+				-2.7
88,580	+				-0.8
88,581	+				+1.0
88,588	-				-2.3
88,588	-				-2.9
88,662	+				-1.4
88,672	+				-0.8
88,680	-				-1.0
88,695	+				-1.4
88,704	-				-0.7
88,704	-				+0.1
88,722	+				-1.2
88,722	+				-1.3
88,730	-				+1.4
88,730	-				-3.1
88,730	-				-0.2
88,737	+				-0.8
88,745	-				-1.1
88,745	-				-2.2
88,784	+				-0.2
88,792	-				-0.3
88,792	-				-2.0
88,807	+				-0.0
88,821	+				-1.8
88,853	-				-2.7
88,856	-				-2.6
88,860	+				-2.9
88,881	+				-2.3
88,889	-				-0.5
88,891	+				-0.1
88,894	-				-0.5
88,899	+				-0.8
88,909	-				-2.5
88,932	+				-0.7
88,940	-				-1.3
88,981	+				-0.0
88,981	+				+2.8
89,014	+				+1.7
89,036	+				+1.8
89,036	+				+2.6
89,036	+				+1.3
89,036	+				+1.7
89,036	+				+2.9
89,036	+				+1.4
89,043	+				-0.9
89,044	-				-0.1
89,044	-				-0.1
89,044	-				-0.3
89,044	-				-0.9
89,044	-				+0.0
89,046	-				-2.8
89,099	-				-3.5
89,171	+				-1.9
89,171	+				-1.8
89,179	-				-1.3
89,181	+				-2.7
89,195	+				-3.2
89,235	-		CCNA_00084	0.11	-1.2
89,269	+		CCNA_00084	0.14	-2.2
89,280	+		CCNA_00084	0.14	-3.5
89,343	+		CCNA_00084	0.18	-2.4
89,349	+		CCNA_00084	0.19	-3.0
89,349	+		CCNA_00084	0.19	-3.8
89,349	+		CCNA_00084	0.19	-0.0
89,349	+		CCNA_00084	0.19	-1.3
89,349	+		CCNA_00084	0.19	-3.5
89,349	+		CCNA_00084	0.19	-2.9
89,351	-		CCNA_00084	0.19	-1.6
89,351	-		CCNA_00084	0.19	-1.9
89,357	-		CCNA_00084	0.19	-2.3
89,357	-		CCNA_00084	0.19	-2.5
89,357	-		CCNA_00084	0.19	-2.5
89,397	+		CCNA_00084	0.22	-2.2
89,405	-		CCNA_00084	0.22	-2.1
89,427	+		CCNA_00084	0.24	-2.4
89,436	-		CCNA_00084	0.24	-2.0
89,441	-		CCNA_00084	0.24	+0.2
89,449	+		CCNA_00084	0.25	-2.2
89,457	-		CCNA_00084	0.25	-1.0
89,476	+		CCNA_00084	0.27	-1.6
89,476	+		CCNA_00084	0.27	-2.7
89,476	+		CCNA_00084	0.27	+0.2
89,484	-		CCNA_00084	0.27	-0.4
89,502	-		CCNA_00084	0.28	+1.2
89,583	+		CCNA_00084	0.33	-3.1
89,598	+		CCNA_00084	0.34	-3.1
89,666	+		CCNA_00084	0.39	-3.5
89,666	+		CCNA_00084	0.39	+0.8
89,674	-		CCNA_00084	0.39	-1.8
89,712	+		CCNA_00084	0.41	-3.9
89,712	+		CCNA_00084	0.41	-3.0
89,720	-		CCNA_00084	0.42	-2.3
89,757	+		CCNA_00084	0.44	-1.7
89,757	+		CCNA_00084	0.44	-2.6
89,757	+		CCNA_00084	0.44	-0.7
89,757	+		CCNA_00084	0.44	-3.6
89,757	+		CCNA_00084	0.44	-3.8
89,758	+		CCNA_00084	0.44	-3.5
89,765	-		CCNA_00084	0.45	-0.2
89,765	-		CCNA_00084	0.45	-1.5
89,765	-		CCNA_00084	0.45	-0.7
89,766	-		CCNA_00084	0.45	-2.3
89,766	-		CCNA_00084	0.45	-1.8
89,790	+		CCNA_00084	0.46	-3.3
89,797	+		CCNA_00084	0.47	-3.2
89,819	-		CCNA_00084	0.48	+0.8
89,824	+		CCNA_00084	0.48	-0.0
89,891	+		CCNA_00084	0.53	-4.1
89,916	+		CCNA_00084	0.54	-3.0
89,941	+		CCNA_00084	0.56	-2.4
89,942	+		CCNA_00084	0.56	-4.0
89,942	+		CCNA_00084	0.56	-2.9
89,947	+		CCNA_00084	0.56	-3.0
89,952	+		CCNA_00084	0.57	-2.4
89,959	+		CCNA_00084	0.57	-3.7
89,959	+		CCNA_00084	0.57	-2.5
89,971	+		CCNA_00084	0.58	-0.4
90,028	-		CCNA_00084	0.61	-2.5
90,040	-		CCNA_00084	0.62	-2.0
90,063	-		CCNA_00084	0.64	-1.5
90,112	+		CCNA_00084	0.67	-4.4
90,184	+		CCNA_00084	0.71	-4.5
90,184	+		CCNA_00084	0.71	-1.8
90,186	-		CCNA_00084	0.71	-1.5
90,194	-		CCNA_00084	0.72	-1.3
90,194	-		CCNA_00084	0.72	-0.3
90,237	+		CCNA_00084	0.74	-1.5
90,237	+		CCNA_00084	0.74	-1.9
90,237	+		CCNA_00084	0.74	-0.7
90,237	+		CCNA_00084	0.74	-2.2
90,245	-		CCNA_00084	0.75	-0.8
90,245	-		CCNA_00084	0.75	-2.0
90,245	-		CCNA_00084	0.75	-1.6
90,292	-		CCNA_00084	0.78	-0.7
90,292	-				+0.8
90,311	+		CCNA_00084	0.79	-1.0
90,330	+		CCNA_00084	0.80	-3.8
90,336	+		CCNA_00084	0.81	-4.2
90,357	-		CCNA_00084	0.82	-3.3
90,364	+		CCNA_00084	0.82	-2.8
90,372	-		CCNA_00084	0.83	-1.3
90,372	-		CCNA_00084	0.83	+0.4
90,405	+		CCNA_00084	0.85	-1.2
90,425	-		CCNA_00084	0.86	-2.7
90,453	+		CCNA_00084	0.88	-3.5
90,482	+		CCNA_00084	0.90	-4.3
90,507	+				-2.2
90,566	+				-3.0
90,574	-				+0.2
90,583	-				+1.8
90,618	-				-2.5
90,647	+				+1.1
90,647	+				+0.1
90,655	-				+0.1
90,655	-				+1.5
90,708	+				+2.2
90,708	+				+1.0
90,708	+				+2.8
90,708	+				+0.6
90,708	+				+1.1
90,708	+				+4.2
90,716	-				-0.6
90,716	-				-2.7
90,716	-				-0.6
90,742	+		CCNA_00085	0.11	+1.5
90,751	-		CCNA_00085	0.13	+0.6
90,805	+		CCNA_00085	0.20	+1.1
90,909	+		CCNA_00085	0.33	+2.3
90,922	+				+1.2
90,927	+		CCNA_00085	0.36	+0.9
90,937	+		CCNA_00085	0.37	+1.1
90,960	+		CCNA_00085	0.40	+1.3
90,960	+		CCNA_00085	0.40	-0.6
90,963	-		CCNA_00085	0.41	+0.7
90,980	-		CCNA_00085	0.43	+0.2
91,002	-		CCNA_00085	0.46	+1.5
91,018	+		CCNA_00085	0.48	+2.1
91,018	+		CCNA_00085	0.48	+3.0
91,018	+		CCNA_00085	0.48	+4.2
91,018	+		CCNA_00085	0.48	+1.6
91,018	+		CCNA_00085	0.48	+2.4
91,018	+		CCNA_00085	0.48	+2.1
91,018	+		CCNA_00085	0.48	+2.8
91,026	-		CCNA_00085	0.49	+0.3
91,026	-		CCNA_00085	0.49	+0.9
91,026	-		CCNA_00085	0.49	-0.2
91,026	-		CCNA_00085	0.49	-0.5
91,026	-		CCNA_00085	0.49	+0.1
91,034	-		CCNA_00085	0.50	-1.8
91,036	-		CCNA_00085	0.50	-1.6
91,039	+		CCNA_00085	0.51	+0.1
91,039	+		CCNA_00085	0.51	+1.9
91,047	-		CCNA_00085	0.52	-2.0
91,063	+		CCNA_00085	0.54	+0.9
91,063	+		CCNA_00085	0.54	+1.5
91,068	+		CCNA_00085	0.54	+0.8
91,073	+		CCNA_00085	0.55	+1.1
91,076	-		CCNA_00085	0.55	+0.6
91,086	-		CCNA_00085	0.57	+0.6
91,101	+		CCNA_00085	0.59	+1.9
91,101	+		CCNA_00085	0.59	+0.6
91,101	+		CCNA_00085	0.59	+1.5
91,101	+		CCNA_00085	0.59	+1.1
91,101	+		CCNA_00085	0.59	+0.2
91,101	+		CCNA_00085	0.59	+0.7
91,109	-		CCNA_00085	0.60	+0.4
91,109	-		CCNA_00085	0.60	+0.1
91,119	+		CCNA_00085	0.61	+1.2
91,119	+		CCNA_00085	0.61	+2.1
91,122	-		CCNA_00085	0.62	-0.0
91,128	-		CCNA_00085	0.62	-0.8
91,163	+		CCNA_00085	0.67	+1.2
91,168	+		CCNA_00085	0.68	+0.3
91,168	+		CCNA_00085	0.68	+1.8
91,168	+		CCNA_00085	0.68	+0.5
91,176	-		CCNA_00085	0.69	+0.1
91,176	-		CCNA_00085	0.69	+0.8
91,178	+		CCNA_00085	0.69	+0.9
91,216	-		CCNA_00085	0.74	-0.0
91,217	-		CCNA_00085	0.74	+0.3
91,223	+		CCNA_00085	0.75	+2.0
91,223	+		CCNA_00085	0.75	+1.2
91,231	-		CCNA_00085	0.76	+1.1
91,231	-		CCNA_00085	0.76	+1.1
91,231	-		CCNA_00085	0.76	+1.2
91,277	-		CCNA_00085	0.82	+0.0
91,334	+		CCNA_00085	0.89	-0.4
91,342	-				+1.9
91,352	+				+1.8
91,370	-				+1.6
91,380	-				+2.6
91,380	-				+1.9
91,380	-				+2.2
91,380	-				+2.5
91,408	+				+3.6
91,454	+				+1.0
91,462	-				+0.3
91,462	-				+2.7
91,464	+				+0.4
91,472	-				+2.4
91,472	-				+3.0
91,474	+				+1.2
91,506	-				+1.6