Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35165
Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,493,048 | + | BPHYT_RS35155 | 0.90 | +0.3 | |
3,493,049 | - | BPHYT_RS35155 | 0.90 | +0.7 | |
3,493,051 | - | BPHYT_RS35155 | 0.90 | +0.2 | |
3,493,099 | + | -0.6 | |||
3,493,141 | + | +0.8 | |||
3,493,181 | - | -0.4 | |||
3,493,183 | + | -0.1 | |||
3,493,186 | + | -0.7 | |||
3,493,186 | + | -0.9 | |||
3,493,187 | - | +0.3 | |||
3,493,724 | - | BPHYT_RS35160 | 0.56 | -0.1 | |
3,493,990 | + | +0.1 | |||
3,493,991 | - | -0.1 | |||
3,494,493 | + | BPHYT_RS35165 | 0.65 | +0.5 | |
3,494,493 | + | BPHYT_RS35165 | 0.65 | -0.1 | |
3,494,512 | - | BPHYT_RS35165 | 0.68 | +0.3 | |
3,494,847 | + | +0.2 | |||
3,495,005 | + | -0.2 | |||
3,495,005 | + | +0.3 | |||
3,495,006 | - | -0.1 | |||
3,495,057 | + | -1.0 | |||
3,495,074 | - | +0.7 | |||
3,495,333 | - | -0.4 | |||
3,495,346 | + | +0.0 | |||
3,495,403 | - | -0.4 | |||
3,495,524 | + | +0.4 | |||
3,495,525 | - | +0.1 |
Or see this region's nucleotide sequence