Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS18730 and BPHYT_RS18735 are separated by 172 nucleotides BPHYT_RS18735 and BPHYT_RS18740 are separated by 308 nucleotides
BPHYT_RS18730: BPHYT_RS18730 - flagellar motor protein MotB, at 4,210,553 to 4,212,307
_RS18730
BPHYT_RS18735: BPHYT_RS18735 - GMC family oxidoreductase, at 4,212,480 to 4,214,138
_RS18735
BPHYT_RS18740: BPHYT_RS18740 - acyl-CoA dehydrogenase, at 4,214,447 to 4,216,132
_RS18740
Position (kb) 4212
4213
4214
4215 Strain fitness (log2 ratio) -2
-1
0
1 at 4211.744 kb on + strand, within BPHYT_RS18730 at 4211.744 kb on + strand, within BPHYT_RS18730 at 4211.744 kb on + strand, within BPHYT_RS18730 at 4211.745 kb on - strand, within BPHYT_RS18730 at 4211.745 kb on - strand, within BPHYT_RS18730 at 4211.745 kb on - strand, within BPHYT_RS18730 at 4211.745 kb on - strand, within BPHYT_RS18730 at 4211.745 kb on - strand, within BPHYT_RS18730 at 4212.343 kb on - strand at 4212.343 kb on - strand at 4212.370 kb on + strand at 4212.371 kb on - strand at 4212.371 kb on - strand at 4212.371 kb on - strand at 4212.725 kb on + strand, within BPHYT_RS18735 at 4212.725 kb on + strand, within BPHYT_RS18735 at 4212.726 kb on - strand, within BPHYT_RS18735 at 4212.726 kb on - strand, within BPHYT_RS18735 at 4212.726 kb on - strand, within BPHYT_RS18735 at 4212.739 kb on + strand, within BPHYT_RS18735 at 4212.739 kb on + strand, within BPHYT_RS18735 at 4212.739 kb on + strand, within BPHYT_RS18735 at 4212.739 kb on + strand, within BPHYT_RS18735 at 4212.739 kb on + strand, within BPHYT_RS18735 at 4212.740 kb on - strand, within BPHYT_RS18735 at 4212.740 kb on - strand, within BPHYT_RS18735 at 4212.805 kb on + strand, within BPHYT_RS18735 at 4212.805 kb on + strand, within BPHYT_RS18735 at 4212.805 kb on + strand, within BPHYT_RS18735 at 4212.805 kb on + strand, within BPHYT_RS18735 at 4212.806 kb on - strand, within BPHYT_RS18735 at 4212.806 kb on - strand, within BPHYT_RS18735 at 4213.006 kb on + strand, within BPHYT_RS18735 at 4213.025 kb on + strand, within BPHYT_RS18735 at 4213.025 kb on + strand, within BPHYT_RS18735 at 4213.026 kb on - strand, within BPHYT_RS18735 at 4213.026 kb on - strand, within BPHYT_RS18735 at 4213.502 kb on + strand, within BPHYT_RS18735 at 4213.528 kb on + strand, within BPHYT_RS18735 at 4213.528 kb on + strand, within BPHYT_RS18735 at 4213.529 kb on - strand, within BPHYT_RS18735 at 4213.532 kb on + strand at 4213.532 kb on + strand, within BPHYT_RS18735 at 4213.532 kb on + strand, within BPHYT_RS18735 at 4213.532 kb on + strand, within BPHYT_RS18735 at 4213.533 kb on - strand, within BPHYT_RS18735 at 4213.535 kb on - strand, within BPHYT_RS18735 at 4213.535 kb on - strand, within BPHYT_RS18735 at 4213.634 kb on - strand, within BPHYT_RS18735 at 4213.644 kb on + strand, within BPHYT_RS18735 at 4213.645 kb on - strand, within BPHYT_RS18735 at 4213.685 kb on - strand, within BPHYT_RS18735 at 4213.758 kb on - strand, within BPHYT_RS18735 at 4213.768 kb on + strand, within BPHYT_RS18735 at 4213.768 kb on + strand, within BPHYT_RS18735 at 4213.768 kb on + strand, within BPHYT_RS18735 at 4213.769 kb on - strand, within BPHYT_RS18735 at 4213.769 kb on - strand, within BPHYT_RS18735 at 4213.945 kb on + strand, within BPHYT_RS18735 at 4213.952 kb on - strand, within BPHYT_RS18735 at 4213.952 kb on - strand, within BPHYT_RS18735 at 4214.125 kb on + strand at 4214.125 kb on + strand at 4214.125 kb on + strand at 4214.125 kb on + strand at 4214.125 kb on + strand at 4214.125 kb on + strand at 4214.126 kb on - strand at 4214.126 kb on - strand at 4214.126 kb on - strand at 4214.126 kb on - strand at 4214.131 kb on + strand at 4214.196 kb on - strand at 4214.217 kb on + strand at 4214.218 kb on - strand at 4214.510 kb on + strand at 4214.511 kb on - strand at 4214.675 kb on - strand, within BPHYT_RS18740 at 4214.908 kb on - strand, within BPHYT_RS18740 at 4214.933 kb on + strand, within BPHYT_RS18740
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0625 mg/ml remove 4,211,744 + BPHYT_RS18730 0.68 +0.2 4,211,744 + BPHYT_RS18730 0.68 -0.0 4,211,744 + BPHYT_RS18730 0.68 -0.6 4,211,745 - BPHYT_RS18730 0.68 +0.1 4,211,745 - BPHYT_RS18730 0.68 +0.2 4,211,745 - BPHYT_RS18730 0.68 -0.3 4,211,745 - BPHYT_RS18730 0.68 +0.9 4,211,745 - BPHYT_RS18730 0.68 +0.2 4,212,343 - -0.1 4,212,343 - -0.2 4,212,370 + +0.0 4,212,371 - -0.0 4,212,371 - +0.4 4,212,371 - -0.1 4,212,725 + BPHYT_RS18735 0.15 -0.9 4,212,725 + BPHYT_RS18735 0.15 -0.0 4,212,726 - BPHYT_RS18735 0.15 +0.7 4,212,726 - BPHYT_RS18735 0.15 -0.3 4,212,726 - BPHYT_RS18735 0.15 +0.1 4,212,739 + BPHYT_RS18735 0.16 +0.0 4,212,739 + BPHYT_RS18735 0.16 +0.3 4,212,739 + BPHYT_RS18735 0.16 -0.0 4,212,739 + BPHYT_RS18735 0.16 -0.1 4,212,739 + BPHYT_RS18735 0.16 +0.3 4,212,740 - BPHYT_RS18735 0.16 +0.2 4,212,740 - BPHYT_RS18735 0.16 -0.5 4,212,805 + BPHYT_RS18735 0.20 +0.1 4,212,805 + BPHYT_RS18735 0.20 +0.5 4,212,805 + BPHYT_RS18735 0.20 +0.4 4,212,805 + BPHYT_RS18735 0.20 -0.2 4,212,806 - BPHYT_RS18735 0.20 +0.0 4,212,806 - BPHYT_RS18735 0.20 +0.5 4,213,006 + BPHYT_RS18735 0.32 +0.6 4,213,025 + BPHYT_RS18735 0.33 -0.2 4,213,025 + BPHYT_RS18735 0.33 +0.1 4,213,026 - BPHYT_RS18735 0.33 -0.1 4,213,026 - BPHYT_RS18735 0.33 +0.3 4,213,502 + BPHYT_RS18735 0.62 -0.4 4,213,528 + BPHYT_RS18735 0.63 +0.1 4,213,528 + BPHYT_RS18735 0.63 +0.0 4,213,529 - BPHYT_RS18735 0.63 -0.3 4,213,532 + +0.9 4,213,532 + BPHYT_RS18735 0.63 +0.1 4,213,532 + BPHYT_RS18735 0.63 -0.7 4,213,532 + BPHYT_RS18735 0.63 +0.5 4,213,533 - BPHYT_RS18735 0.63 -2.5 4,213,535 - BPHYT_RS18735 0.64 -0.2 4,213,535 - BPHYT_RS18735 0.64 +0.2 4,213,634 - BPHYT_RS18735 0.70 +0.2 4,213,644 + BPHYT_RS18735 0.70 -0.3 4,213,645 - BPHYT_RS18735 0.70 -2.2 4,213,685 - BPHYT_RS18735 0.73 +0.1 4,213,758 - BPHYT_RS18735 0.77 -0.1 4,213,768 + BPHYT_RS18735 0.78 -0.3 4,213,768 + BPHYT_RS18735 0.78 -0.1 4,213,768 + BPHYT_RS18735 0.78 +0.1 4,213,769 - BPHYT_RS18735 0.78 -0.8 4,213,769 - BPHYT_RS18735 0.78 -0.9 4,213,945 + BPHYT_RS18735 0.88 -0.1 4,213,952 - BPHYT_RS18735 0.89 +0.2 4,213,952 - BPHYT_RS18735 0.89 -0.0 4,214,125 + +0.5 4,214,125 + +0.1 4,214,125 + -0.3 4,214,125 + -1.0 4,214,125 + -0.3 4,214,125 + +0.0 4,214,126 - +0.1 4,214,126 - +0.0 4,214,126 - -0.6 4,214,126 - +0.3 4,214,131 + +0.7 4,214,196 - -0.2 4,214,217 + +0.2 4,214,218 - +0.3 4,214,510 + +0.9 4,214,511 - +0.9 4,214,675 - BPHYT_RS18740 0.14 -0.0 4,214,908 - BPHYT_RS18740 0.27 +0.5 4,214,933 + BPHYT_RS18740 0.29 -0.5
Or see this region's nucleotide sequence