Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18420

Experiment: Polymyxin B sulfate 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0625 mg/ml
4,140,710	+		BPHYT_RS18410	0.35	-1.3
4,140,710	+		BPHYT_RS18410	0.35	-0.3
4,140,711	-		BPHYT_RS18410	0.35	+0.7
4,140,776	+				+1.1
4,140,797	+		BPHYT_RS18410	0.48	+0.4
4,140,797	+		BPHYT_RS18410	0.48	-0.4
4,141,034	+		BPHYT_RS18410	0.85	-0.5
4,141,034	+		BPHYT_RS18410	0.85	+0.0
4,141,035	-		BPHYT_RS18410	0.85	+0.7
4,141,257	-				+0.1
4,141,311	+				+0.4
4,141,311	+				+0.2
4,141,311	+				-0.1
4,141,448	+		BPHYT_RS18415	0.52	+0.7
4,141,536	+		BPHYT_RS18415	0.86	-0.2
4,141,536	+		BPHYT_RS18415	0.86	-0.3
4,142,061	+		BPHYT_RS18420	0.67	-0.8
4,142,062	-		BPHYT_RS18420	0.67	-1.3
4,142,164	-		BPHYT_RS18420	0.85	-0.7
4,142,238	-				-0.7
4,142,254	-				-0.1
4,142,275	+				+0.3
4,142,276	-				-1.1
4,142,305	+		BPHYT_RS18425	0.14	-0.1
4,142,305	+		BPHYT_RS18425	0.14	-0.2
4,142,353	-		BPHYT_RS18425	0.27	+0.2
4,142,486	+		BPHYT_RS18425	0.62	-0.1
4,142,486	+		BPHYT_RS18425	0.62	-0.2
4,142,487	-		BPHYT_RS18425	0.62	-0.0
4,142,487	-		BPHYT_RS18425	0.62	+0.2
4,142,487	-		BPHYT_RS18425	0.62	+0.0
4,142,546	+		BPHYT_RS18425	0.78	-0.5
4,142,547	-		BPHYT_RS18425	0.78	+0.9
4,142,651	+				+0.2
4,142,651	+				-0.0
4,142,726	-				+0.3
4,142,726	-				+0.5
4,142,750	+				-0.1
4,142,750	+				+0.4
4,142,750	+				+0.4
4,142,750	+				-0.3
4,142,751	-				+1.7
4,142,751	-				+0.4
4,142,751	-				+0.1
4,142,751	-				-1.3
4,142,751	-				-0.5
4,142,844	-				+0.1
4,142,943	+		BPHYT_RS18430	0.18	-0.3
4,142,943	+		BPHYT_RS18430	0.18	+1.1
4,142,944	-		BPHYT_RS18430	0.18	-0.4
4,142,982	-		BPHYT_RS18430	0.24	-0.1
4,142,985	+		BPHYT_RS18430	0.25	-0.1
4,143,002	+		BPHYT_RS18430	0.27	-0.8
4,143,003	-		BPHYT_RS18430	0.27	+0.1
4,143,146	-		BPHYT_RS18430	0.49	-0.0
4,143,146	-		BPHYT_RS18430	0.49	-0.3