Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17755

Experiment: Polymyxin B sulfate 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0625 mg/ml
4,007,636	+		BPHYT_RS17750	0.29	+1.6
4,007,636	+		BPHYT_RS17750	0.29	-0.1
4,007,636	+		BPHYT_RS17750	0.29	-0.5
4,007,637	-		BPHYT_RS17750	0.29	-0.5
4,007,678	+		BPHYT_RS17750	0.33	+0.2
4,007,678	+		BPHYT_RS17750	0.33	-0.5
4,007,679	-		BPHYT_RS17750	0.33	-0.1
4,007,697	-		BPHYT_RS17750	0.35	-0.6
4,007,697	-		BPHYT_RS17750	0.35	-0.2
4,007,717	+		BPHYT_RS17750	0.37	-1.4
4,007,718	-		BPHYT_RS17750	0.37	+1.2
4,007,828	+		BPHYT_RS17750	0.48	-0.8
4,007,829	-		BPHYT_RS17750	0.48	-0.4
4,007,829	-		BPHYT_RS17750	0.48	-0.3
4,007,829	-		BPHYT_RS17750	0.48	-0.2
4,007,846	+		BPHYT_RS17750	0.50	-1.2
4,007,846	+		BPHYT_RS17750	0.50	-0.5
4,007,847	-		BPHYT_RS17750	0.50	-0.8
4,007,847	-		BPHYT_RS17750	0.50	+0.9
4,007,847	-		BPHYT_RS17750	0.50	+0.8
4,007,847	-		BPHYT_RS17750	0.50	-1.6
4,007,849	+		BPHYT_RS17750	0.50	+0.1
4,007,849	+		BPHYT_RS17750	0.50	-0.3
4,007,849	+		BPHYT_RS17750	0.50	-1.3
4,007,849	+		BPHYT_RS17750	0.50	+0.4
4,007,849	+		BPHYT_RS17750	0.50	-0.5
4,007,849	+		BPHYT_RS17750	0.50	-0.9
4,007,849	+		BPHYT_RS17750	0.50	-0.6
4,007,850	-		BPHYT_RS17750	0.50	-0.4
4,007,850	-		BPHYT_RS17750	0.50	+0.3
4,007,850	-		BPHYT_RS17750	0.50	-0.2
4,007,850	-		BPHYT_RS17750	0.50	-1.4
4,007,912	+		BPHYT_RS17750	0.56	-1.6
4,007,913	-		BPHYT_RS17750	0.56	-0.2
4,008,098	+		BPHYT_RS17750	0.74	-0.5
4,008,098	+		BPHYT_RS17750	0.74	-0.7
4,008,098	+		BPHYT_RS17750	0.74	-1.0
4,008,099	-		BPHYT_RS17750	0.74	+0.3
4,008,099	-		BPHYT_RS17750	0.74	+0.7
4,008,099	-		BPHYT_RS17750	0.74	-0.0
4,008,167	+		BPHYT_RS17750	0.81	-1.2
4,008,168	-		BPHYT_RS17750	0.81	-0.4
4,008,168	-		BPHYT_RS17750	0.81	-0.2
4,008,194	+		BPHYT_RS17750	0.84	-0.9
4,008,280	-				-0.5
4,008,365	-				+0.0
4,008,365	-				-1.0
4,008,602	-		BPHYT_RS17755	0.41	-1.0
4,008,602	-		BPHYT_RS17755	0.41	-2.1
4,008,661	+		BPHYT_RS17755	0.52	-1.4
4,008,697	+		BPHYT_RS17755	0.58	-1.6
4,008,697	+		BPHYT_RS17755	0.58	-2.3
4,008,698	-		BPHYT_RS17755	0.58	-2.4
4,008,698	-		BPHYT_RS17755	0.58	-1.9
4,008,698	-		BPHYT_RS17755	0.58	-0.4
4,008,785	+		BPHYT_RS17755	0.74	-4.1
4,009,025	+				-2.3
4,009,026	-				-0.5
4,009,026	-				-0.4
4,009,026	-				-0.6
4,009,082	+				-2.1
4,009,292	+		BPHYT_RS17760	0.35	-3.4
4,009,292	+		BPHYT_RS17760	0.35	-2.2
4,009,577	+		BPHYT_RS17760	0.72	-2.4
4,009,578	-		BPHYT_RS17760	0.72	-3.0
4,009,580	+		BPHYT_RS17760	0.72	-2.9
4,009,581	-		BPHYT_RS17760	0.73	-2.9
4,009,643	+		BPHYT_RS17760	0.81	-2.1
4,009,643	+		BPHYT_RS17760	0.81	-1.9
4,009,644	-		BPHYT_RS17760	0.81	-3.3
4,009,644	-		BPHYT_RS17760	0.81	-4.2
4,009,648	-		BPHYT_RS17760	0.81	-2.6
4,009,740	-				-3.9
4,009,740	-				-2.4