Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16065
Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,644,203 | - | BPHYT_RS16060 | 0.46 | -0.3 | |
3,644,870 | + | BPHYT_RS16060 | 0.89 | +0.3 | |
3,644,870 | + | BPHYT_RS16060 | 0.89 | -0.1 | |
3,644,870 | + | BPHYT_RS16060 | 0.89 | -0.3 | |
3,645,020 | - | -1.0 | |||
3,645,072 | - | +0.2 | |||
3,645,594 | + | BPHYT_RS16065 | 0.52 | -1.9 | |
3,646,064 | + | -0.1 | |||
3,646,390 | - | BPHYT_RS16070 | 0.23 | -0.2 | |
3,646,578 | - | BPHYT_RS16070 | 0.42 | -1.2 | |
3,646,578 | - | BPHYT_RS16070 | 0.42 | -0.2 | |
3,646,973 | + | BPHYT_RS16070 | 0.83 | +0.3 | |
3,646,973 | + | BPHYT_RS16070 | 0.83 | -0.6 | |
3,646,973 | + | BPHYT_RS16070 | 0.83 | +0.0 | |
3,646,974 | - | BPHYT_RS16070 | 0.83 | -0.2 | |
3,647,036 | + | BPHYT_RS16070 | 0.89 | +0.5 |
Or see this region's nucleotide sequence