Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14870
Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,381,608 | - | BPHYT_RS14865 | 0.53 | -3.8 | |
3,381,641 | - | BPHYT_RS14865 | 0.56 | -4.1 | |
3,381,971 | - | BPHYT_RS14865 | 0.79 | -4.7 | |
3,382,235 | - | -4.1 | |||
3,382,454 | - | -0.3 | |||
3,382,454 | - | -1.9 | |||
3,383,595 | - | -0.3 | |||
3,383,595 | - | +0.0 | |||
3,383,595 | - | +0.5 | |||
3,383,595 | - | -0.6 | |||
3,383,604 | - | -1.1 | |||
3,383,604 | - | +0.1 | |||
3,383,941 | - | +0.1 | |||
3,384,037 | - | -1.5 | |||
3,384,041 | + | -0.8 | |||
3,384,042 | - | +0.4 | |||
3,384,089 | - | +0.0 | |||
3,384,142 | + | +0.1 | |||
3,384,315 | + | -1.1 | |||
3,384,315 | + | +0.8 | |||
3,384,316 | - | -0.2 | |||
3,384,316 | - | -0.4 | |||
3,384,475 | + | BPHYT_RS14880 | 0.17 | -0.2 | |
3,384,476 | - | BPHYT_RS14880 | 0.17 | +0.2 |
Or see this region's nucleotide sequence