Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08945

Experiment: Polymyxin B sulfate 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0625 mg/ml
2,024,753	-				-0.2
2,024,785	+				-2.6
2,024,786	-				-2.1
2,024,899	-				-0.1
2,024,899	-				-1.4
2,025,084	+		BPHYT_RS08945	0.15	-2.6
2,025,084	+		BPHYT_RS08945	0.15	+0.7
2,025,084	+		BPHYT_RS08945	0.15	-2.5
2,025,085	-		BPHYT_RS08945	0.16	-0.6
2,025,088	+		BPHYT_RS08945	0.17	-3.8
2,025,089	-		BPHYT_RS08945	0.17	+0.2
2,025,339	+		BPHYT_RS08945	0.83	-2.9
2,025,340	-		BPHYT_RS08945	0.84	-1.4
2,025,392	+				-2.5
2,025,392	+				-2.6
2,025,393	-				-1.2
2,025,581	+				-2.9
2,025,582	-				+0.4
2,025,857	+				+0.5
2,025,858	-				-1.3
2,025,858	-				-0.4
2,026,064	+		BPHYT_RS08950	0.21	-1.1
2,026,065	-		BPHYT_RS08950	0.21	+0.4
2,026,065	-		BPHYT_RS08950	0.21	-0.1
2,026,109	+		BPHYT_RS08950	0.24	+0.7
2,026,109	+		BPHYT_RS08950	0.24	-0.5
2,026,109	+		BPHYT_RS08950	0.24	-0.0
2,026,110	-		BPHYT_RS08950	0.24	+1.2
2,026,110	-		BPHYT_RS08950	0.24	+0.7
2,026,110	-		BPHYT_RS08950	0.24	+0.1
2,026,251	-		BPHYT_RS08950	0.36	+0.0
2,026,251	-		BPHYT_RS08950	0.36	+0.4
2,026,251	-		BPHYT_RS08950	0.36	+0.0
2,026,252	+				-1.4
2,026,271	-		BPHYT_RS08950	0.37	-0.1
2,026,367	+		BPHYT_RS08950	0.45	+0.1