Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS05695 and BPHYT_RS05700 overlap by 11 nucleotides BPHYT_RS05700 and BPHYT_RS05705 overlap by 11 nucleotides BPHYT_RS05705 and BPHYT_RS05710 overlap by 4 nucleotides BPHYT_RS05710 and BPHYT_RS05715 are separated by 217 nucleotides BPHYT_RS05715 and BPHYT_RS05720 are separated by 418 nucleotides
BPHYT_RS05695: BPHYT_RS05695 - transcriptional regulator, at 1,299,247 to 1,300,137
_RS05695
BPHYT_RS05700: BPHYT_RS05700 - hypothetical protein, at 1,300,127 to 1,300,441
_RS05700
BPHYT_RS05705: BPHYT_RS05705 - hypothetical protein, at 1,300,431 to 1,300,676
_RS05705
BPHYT_RS05710: BPHYT_RS05710 - hypothetical protein, at 1,300,673 to 1,301,020
_RS05710
BPHYT_RS05715: BPHYT_RS05715 - hypothetical protein, at 1,301,238 to 1,301,435
_RS05715
BPHYT_RS05720: BPHYT_RS05720 - hypothetical protein, at 1,301,854 to 1,302,054
_RS05720
Position (kb) 1300
1301
1302 Strain fitness (log2 ratio) -1
0
1 at 1299.866 kb on + strand, within BPHYT_RS05695 at 1299.867 kb on - strand, within BPHYT_RS05695 at 1299.872 kb on + strand, within BPHYT_RS05695 at 1299.902 kb on - strand, within BPHYT_RS05695 at 1299.932 kb on + strand, within BPHYT_RS05695 at 1300.194 kb on + strand, within BPHYT_RS05700 at 1300.195 kb on - strand, within BPHYT_RS05700 at 1300.360 kb on + strand, within BPHYT_RS05700 at 1300.360 kb on + strand, within BPHYT_RS05700 at 1300.623 kb on - strand, within BPHYT_RS05705 at 1300.732 kb on + strand, within BPHYT_RS05710 at 1300.851 kb on + strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.862 kb on + strand, within BPHYT_RS05710 at 1300.896 kb on + strand, within BPHYT_RS05710 at 1300.896 kb on + strand, within BPHYT_RS05710 at 1300.985 kb on - strand, within BPHYT_RS05710 at 1301.498 kb on + strand at 1301.498 kb on + strand at 1301.638 kb on - strand at 1301.642 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0625 mg/ml remove 1,299,866 + BPHYT_RS05695 0.69 -0.2 1,299,867 - BPHYT_RS05695 0.70 -0.4 1,299,872 + BPHYT_RS05695 0.70 -0.1 1,299,902 - BPHYT_RS05695 0.74 +0.3 1,299,932 + BPHYT_RS05695 0.77 -0.1 1,300,194 + BPHYT_RS05700 0.21 +0.4 1,300,195 - BPHYT_RS05700 0.22 -0.0 1,300,360 + BPHYT_RS05700 0.74 -0.4 1,300,360 + BPHYT_RS05700 0.74 -0.1 1,300,623 - BPHYT_RS05705 0.78 +0.1 1,300,732 + BPHYT_RS05710 0.17 +0.1 1,300,851 + BPHYT_RS05710 0.51 +0.3 1,300,852 - BPHYT_RS05710 0.51 +0.1 1,300,852 - BPHYT_RS05710 0.51 +0.3 1,300,852 - BPHYT_RS05710 0.51 -0.1 1,300,862 + BPHYT_RS05710 0.54 -0.3 1,300,896 + BPHYT_RS05710 0.64 +0.4 1,300,896 + BPHYT_RS05710 0.64 +0.2 1,300,985 - BPHYT_RS05710 0.90 -0.1 1,301,498 + -0.6 1,301,498 + +1.5 1,301,638 - +0.4 1,301,642 - +0.3
Or see this region's nucleotide sequence