Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04400
Experiment: Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,014,513 | + | -0.0 | |||
1,014,551 | + | -0.5 | |||
1,014,588 | - | -0.3 | |||
1,014,699 | - | -0.9 | |||
1,014,833 | + | +0.1 | |||
1,014,834 | - | -3.6 | |||
1,014,847 | + | +0.1 | |||
1,014,847 | + | -0.2 | |||
1,014,848 | - | -1.2 | |||
1,014,848 | - | -0.3 | |||
1,014,848 | - | -0.7 | |||
1,014,908 | + | -0.5 | |||
1,014,910 | + | +1.0 | |||
1,015,046 | - | -0.2 | |||
1,015,189 | - | -0.4 | |||
1,015,211 | + | +0.2 | |||
1,015,243 | + | +0.9 | |||
1,015,354 | - | BPHYT_RS04400 | 0.20 | +0.5 | |
1,015,836 | - | BPHYT_RS04400 | 0.86 | +0.0 | |
1,015,869 | + | -0.6 | |||
1,015,870 | - | +0.4 | |||
1,016,081 | + | -0.2 | |||
1,016,082 | - | +0.6 | |||
1,016,195 | - | +0.0 | |||
1,016,265 | + | -0.1 | |||
1,016,329 | + | +0.0 | |||
1,016,384 | + | -0.3 | |||
1,016,530 | + | -0.3 | |||
1,016,867 | + | +0.2 | |||
1,016,920 | + | +0.0 |
Or see this region's nucleotide sequence