Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03961 and SMc04081 overlap by 4 nucleotides SMc04081 and SMc03963 overlap by 4 nucleotides
SMc03961: SMc03961 - sulfolipid (UDP-sulfoquinovose) biosynthesis protein, at 2,954,817 to 2,956,037
SMc03961
SMc04081: SMc04081 - glycosyl transferase (sulfolipid biosynthesis) protein, at 2,956,034 to 2,956,909
SMc04081
SMc03963: SMc03963 - sulfolipid biosynthesis protein, at 2,956,906 to 2,957,832
SMc03963
Position (kb)
2956
2957 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2955.160 kb on - strand, within SMc03961 at 2955.248 kb on + strand, within SMc03961 at 2955.249 kb on - strand, within SMc03961 at 2955.249 kb on - strand, within SMc03961 at 2955.301 kb on - strand, within SMc03961 at 2955.381 kb on + strand, within SMc03961 at 2955.382 kb on - strand, within SMc03961 at 2955.424 kb on - strand, within SMc03961 at 2955.544 kb on - strand, within SMc03961 at 2955.588 kb on + strand, within SMc03961 at 2955.639 kb on - strand, within SMc03961 at 2955.639 kb on - strand, within SMc03961 at 2956.128 kb on - strand, within SMc04081 at 2956.186 kb on + strand, within SMc04081 at 2956.186 kb on + strand, within SMc04081 at 2956.186 kb on + strand, within SMc04081 at 2956.393 kb on - strand, within SMc04081 at 2956.393 kb on - strand, within SMc04081 at 2956.511 kb on + strand, within SMc04081 at 2956.511 kb on + strand, within SMc04081 at 2956.512 kb on - strand, within SMc04081 at 2956.703 kb on + strand, within SMc04081 at 2956.703 kb on + strand, within SMc04081 at 2956.704 kb on - strand, within SMc04081 at 2956.704 kb on - strand, within SMc04081 at 2956.704 kb on - strand, within SMc04081 at 2956.704 kb on - strand, within SMc04081 at 2956.766 kb on + strand, within SMc04081 at 2956.767 kb on - strand, within SMc04081 at 2957.097 kb on + strand, within SMc03963 at 2957.098 kb on - strand, within SMc03963 at 2957.098 kb on - strand, within SMc03963 at 2957.101 kb on + strand, within SMc03963 at 2957.101 kb on + strand, within SMc03963 at 2957.102 kb on - strand, within SMc03963 at 2957.102 kb on - strand, within SMc03963 at 2957.104 kb on + strand, within SMc03963 at 2957.105 kb on - strand, within SMc03963 at 2957.332 kb on + strand, within SMc03963 at 2957.333 kb on - strand, within SMc03963 at 2957.342 kb on + strand, within SMc03963 at 2957.422 kb on + strand, within SMc03963 at 2957.476 kb on + strand, within SMc03963 at 2957.476 kb on + strand, within SMc03963
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 2,955,160 - SMc03961 0.28 +1.6 2,955,248 + SMc03961 0.35 +1.2 2,955,249 - SMc03961 0.35 +2.8 2,955,249 - SMc03961 0.35 +1.7 2,955,301 - SMc03961 0.40 +1.7 2,955,381 + SMc03961 0.46 +1.9 2,955,382 - SMc03961 0.46 +1.8 2,955,424 - SMc03961 0.50 +1.8 2,955,544 - SMc03961 0.60 +1.9 2,955,588 + SMc03961 0.63 +2.4 2,955,639 - SMc03961 0.67 +1.3 2,955,639 - SMc03961 0.67 +1.7 2,956,128 - SMc04081 0.11 +3.7 2,956,186 + SMc04081 0.17 +2.5 2,956,186 + SMc04081 0.17 +2.4 2,956,186 + SMc04081 0.17 +1.8 2,956,393 - SMc04081 0.41 +2.3 2,956,393 - SMc04081 0.41 +1.9 2,956,511 + SMc04081 0.54 +2.0 2,956,511 + SMc04081 0.54 +2.1 2,956,512 - SMc04081 0.55 +2.4 2,956,703 + SMc04081 0.76 +2.1 2,956,703 + SMc04081 0.76 +0.7 2,956,704 - SMc04081 0.76 +2.4 2,956,704 - SMc04081 0.76 +2.3 2,956,704 - SMc04081 0.76 +2.3 2,956,704 - SMc04081 0.76 +2.4 2,956,766 + SMc04081 0.84 +2.3 2,956,767 - SMc04081 0.84 +2.2 2,957,097 + SMc03963 0.21 +1.2 2,957,098 - SMc03963 0.21 +0.9 2,957,098 - SMc03963 0.21 +0.4 2,957,101 + SMc03963 0.21 +1.4 2,957,101 + SMc03963 0.21 +2.0 2,957,102 - SMc03963 0.21 +2.0 2,957,102 - SMc03963 0.21 +1.6 2,957,104 + SMc03963 0.21 +1.4 2,957,105 - SMc03963 0.21 +1.5 2,957,332 + SMc03963 0.46 +1.5 2,957,333 - SMc03963 0.46 +1.1 2,957,342 + SMc03963 0.47 +0.7 2,957,422 + SMc03963 0.56 +1.3 2,957,476 + SMc03963 0.61 +1.8 2,957,476 + SMc03963 0.61 +1.5
Or see this region's nucleotide sequence