Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03924 and SMc03925 are separated by 4 nucleotides SMc03925 and SMc03926 are separated by 229 nucleotides
SMc03924: SMc03924 - glycogen synthase, at 3,071,302 to 3,072,744
SMc03924
SMc03925: SMc03925 - phosphoglucomutase, at 3,072,749 to 3,074,377
SMc03925
SMc03926: SMc03926 - glycosyl hydrolase, at 3,074,607 to 3,076,595
SMc03926
Position (kb)
3072
3073
3074
3075 Strain fitness (log2 ratio)
-2
-1
0
1 at 3071.882 kb on - strand, within SMc03924 at 3071.882 kb on - strand, within SMc03924 at 3071.953 kb on + strand, within SMc03924 at 3071.953 kb on + strand, within SMc03924 at 3071.954 kb on - strand, within SMc03924 at 3071.954 kb on - strand, within SMc03924 at 3071.954 kb on - strand, within SMc03924 at 3072.098 kb on - strand, within SMc03924 at 3072.345 kb on + strand, within SMc03924 at 3072.454 kb on + strand, within SMc03924 at 3072.455 kb on - strand, within SMc03924 at 3072.593 kb on + strand, within SMc03924 at 3072.625 kb on + strand at 3072.625 kb on + strand at 3072.718 kb on + strand at 3074.516 kb on - strand at 3074.516 kb on - strand at 3074.560 kb on - strand at 3074.667 kb on - strand at 3074.667 kb on - strand at 3074.791 kb on + strand at 3074.792 kb on - strand at 3074.792 kb on - strand at 3074.792 kb on - strand at 3074.792 kb on - strand at 3074.792 kb on - strand at 3074.792 kb on - strand at 3074.833 kb on - strand, within SMc03926 at 3074.886 kb on + strand, within SMc03926 at 3074.887 kb on - strand, within SMc03926 at 3075.037 kb on - strand, within SMc03926 at 3075.238 kb on - strand, within SMc03926 at 3075.238 kb on - strand, within SMc03926
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 3,071,882 - SMc03924 0.40 +0.2 3,071,882 - SMc03924 0.40 -0.7 3,071,953 + SMc03924 0.45 +1.1 3,071,953 + SMc03924 0.45 -2.0 3,071,954 - SMc03924 0.45 -0.9 3,071,954 - SMc03924 0.45 -1.9 3,071,954 - SMc03924 0.45 -1.9 3,072,098 - SMc03924 0.55 -1.3 3,072,345 + SMc03924 0.72 -0.7 3,072,454 + SMc03924 0.80 -2.3 3,072,455 - SMc03924 0.80 +0.2 3,072,593 + SMc03924 0.89 -0.9 3,072,625 + -0.3 3,072,625 + +0.4 3,072,718 + -1.2 3,074,516 - +1.2 3,074,516 - +1.6 3,074,560 - -0.6 3,074,667 - +0.2 3,074,667 - -1.7 3,074,791 + +0.4 3,074,792 - -0.9 3,074,792 - -1.3 3,074,792 - -0.1 3,074,792 - -0.0 3,074,792 - -1.7 3,074,792 - -0.6 3,074,833 - SMc03926 0.11 +0.2 3,074,886 + SMc03926 0.14 -0.4 3,074,887 - SMc03926 0.14 -0.3 3,075,037 - SMc03926 0.22 +0.2 3,075,238 - SMc03926 0.32 -1.2 3,075,238 - SMc03926 0.32 -0.4
Or see this region's nucleotide sequence