Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02269 and SMc02270 are separated by 23 nucleotides SMc02270 and SMc02271 are separated by 81 nucleotides SMc02271 and SMc02272 are separated by 39 nucleotides
SMc02269: SMc02269 - capsular polysaccharide biosynthesis/export protein, at 635,270 to 636,595
SMc02269
SMc02270: SMc02270 - capsular polysaccharide biosynthesis\export transmembrane protein, at 636,619 to 638,235
SMc02270
SMc02271: SMc02271 - ribitol type dehydrogenase, at 638,317 to 639,120
SMc02271
SMc02272: SMc02272 - acyl-transferase transferase, at 639,160 to 640,575
SMc02272
Position (kb) 636
637
638
639 Strain fitness (log2 ratio) -1
0
1
2
3 at 635.633 kb on + strand, within SMc02269 at 635.913 kb on + strand, within SMc02269 at 636.006 kb on + strand, within SMc02269 at 636.085 kb on - strand, within SMc02269 at 636.096 kb on + strand, within SMc02269 at 636.097 kb on - strand, within SMc02269 at 636.253 kb on - strand, within SMc02269 at 636.318 kb on + strand, within SMc02269 at 636.319 kb on - strand, within SMc02269 at 636.319 kb on - strand, within SMc02269 at 636.319 kb on - strand, within SMc02269 at 636.384 kb on + strand, within SMc02269 at 636.384 kb on + strand, within SMc02269 at 636.385 kb on - strand, within SMc02269 at 636.414 kb on + strand, within SMc02269 at 636.414 kb on + strand, within SMc02269 at 636.414 kb on + strand, within SMc02269 at 636.419 kb on - strand, within SMc02269 at 636.419 kb on - strand, within SMc02269 at 636.419 kb on - strand, within SMc02269 at 636.575 kb on + strand at 636.575 kb on + strand at 636.575 kb on + strand at 636.576 kb on - strand at 636.576 kb on - strand at 636.576 kb on - strand at 636.576 kb on - strand at 636.583 kb on + strand at 636.583 kb on + strand at 636.584 kb on - strand at 636.620 kb on + strand at 636.902 kb on + strand, within SMc02270 at 636.902 kb on + strand, within SMc02270 at 636.902 kb on + strand, within SMc02270 at 636.902 kb on + strand, within SMc02270 at 636.902 kb on + strand, within SMc02270 at 636.903 kb on - strand, within SMc02270 at 636.903 kb on - strand, within SMc02270 at 636.903 kb on - strand, within SMc02270 at 636.906 kb on + strand, within SMc02270 at 636.907 kb on - strand, within SMc02270 at 636.907 kb on - strand, within SMc02270 at 636.928 kb on - strand, within SMc02270 at 637.055 kb on + strand, within SMc02270 at 637.055 kb on + strand, within SMc02270 at 637.056 kb on - strand, within SMc02270 at 637.056 kb on - strand, within SMc02270 at 637.101 kb on + strand, within SMc02270 at 637.101 kb on + strand, within SMc02270 at 637.102 kb on - strand, within SMc02270 at 637.102 kb on - strand, within SMc02270 at 637.102 kb on - strand, within SMc02270 at 637.160 kb on + strand, within SMc02270 at 637.226 kb on + strand at 637.226 kb on + strand, within SMc02270 at 637.227 kb on - strand, within SMc02270 at 637.244 kb on + strand, within SMc02270 at 637.244 kb on + strand, within SMc02270 at 637.244 kb on + strand, within SMc02270 at 637.245 kb on - strand, within SMc02270 at 637.250 kb on + strand, within SMc02270 at 637.250 kb on + strand, within SMc02270 at 637.447 kb on + strand, within SMc02270 at 637.447 kb on + strand, within SMc02270 at 637.448 kb on - strand, within SMc02270 at 637.448 kb on - strand, within SMc02270 at 637.505 kb on - strand, within SMc02270 at 637.505 kb on - strand, within SMc02270 at 637.671 kb on - strand, within SMc02270 at 637.671 kb on - strand, within SMc02270 at 637.763 kb on + strand, within SMc02270 at 637.764 kb on - strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.769 kb on + strand, within SMc02270 at 637.770 kb on - strand, within SMc02270 at 637.770 kb on - strand, within SMc02270 at 637.793 kb on + strand, within SMc02270 at 637.793 kb on + strand, within SMc02270 at 637.793 kb on + strand, within SMc02270 at 637.794 kb on - strand, within SMc02270 at 637.838 kb on + strand, within SMc02270 at 637.838 kb on + strand, within SMc02270 at 637.839 kb on - strand, within SMc02270 at 637.853 kb on + strand, within SMc02270 at 637.854 kb on - strand, within SMc02270 at 637.976 kb on + strand, within SMc02270 at 637.976 kb on + strand, within SMc02270 at 638.126 kb on + strand at 638.127 kb on - strand at 638.153 kb on + strand at 638.153 kb on + strand at 638.271 kb on + strand at 638.271 kb on + strand at 638.278 kb on + strand at 638.278 kb on + strand at 638.282 kb on - strand at 638.282 kb on - strand at 638.282 kb on - strand at 638.282 kb on - strand at 638.282 kb on - strand at 638.506 kb on + strand, within SMc02271 at 638.507 kb on - strand, within SMc02271 at 638.667 kb on + strand, within SMc02271 at 638.667 kb on + strand, within SMc02271 at 638.668 kb on - strand, within SMc02271 at 638.670 kb on - strand, within SMc02271 at 638.675 kb on + strand, within SMc02271 at 638.675 kb on + strand, within SMc02271 at 638.676 kb on - strand, within SMc02271
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 635,633 + SMc02269 0.27 +1.6 635,913 + SMc02269 0.48 +1.7 636,006 + SMc02269 0.56 +1.2 636,085 - SMc02269 0.61 +2.0 636,096 + SMc02269 0.62 +0.0 636,097 - SMc02269 0.62 +0.6 636,253 - SMc02269 0.74 +1.3 636,318 + SMc02269 0.79 +3.1 636,319 - SMc02269 0.79 +1.5 636,319 - SMc02269 0.79 +0.7 636,319 - SMc02269 0.79 +2.5 636,384 + SMc02269 0.84 +0.7 636,384 + SMc02269 0.84 +0.9 636,385 - SMc02269 0.84 +1.7 636,414 + SMc02269 0.86 +1.9 636,414 + SMc02269 0.86 +1.4 636,414 + SMc02269 0.86 +1.6 636,419 - SMc02269 0.87 +1.4 636,419 - SMc02269 0.87 +1.0 636,419 - SMc02269 0.87 +1.2 636,575 + +1.3 636,575 + +1.2 636,575 + +0.9 636,576 - -0.4 636,576 - +0.0 636,576 - +0.2 636,576 - -0.2 636,583 + +0.3 636,583 + +1.0 636,584 - +1.2 636,620 + +0.7 636,902 + SMc02270 0.18 +2.0 636,902 + SMc02270 0.18 +2.1 636,902 + SMc02270 0.18 +1.3 636,902 + SMc02270 0.18 +2.0 636,902 + SMc02270 0.18 +2.0 636,903 - SMc02270 0.18 +1.9 636,903 - SMc02270 0.18 +2.4 636,903 - SMc02270 0.18 +1.7 636,906 + SMc02270 0.18 +3.1 636,907 - SMc02270 0.18 +2.5 636,907 - SMc02270 0.18 +2.0 636,928 - SMc02270 0.19 +1.1 637,055 + SMc02270 0.27 +1.6 637,055 + SMc02270 0.27 +2.2 637,056 - SMc02270 0.27 +2.1 637,056 - SMc02270 0.27 +1.8 637,101 + SMc02270 0.30 +1.9 637,101 + SMc02270 0.30 +1.6 637,102 - SMc02270 0.30 +1.3 637,102 - SMc02270 0.30 +1.8 637,102 - SMc02270 0.30 +1.3 637,160 + SMc02270 0.33 +1.8 637,226 + +0.1 637,226 + SMc02270 0.38 +2.1 637,227 - SMc02270 0.38 +2.6 637,244 + SMc02270 0.39 +1.6 637,244 + SMc02270 0.39 +1.8 637,244 + SMc02270 0.39 +1.3 637,245 - SMc02270 0.39 +1.8 637,250 + SMc02270 0.39 +2.7 637,250 + SMc02270 0.39 +1.7 637,447 + SMc02270 0.51 +2.1 637,447 + SMc02270 0.51 +2.0 637,448 - SMc02270 0.51 +1.0 637,448 - SMc02270 0.51 +2.8 637,505 - SMc02270 0.55 +1.6 637,505 - SMc02270 0.55 +2.0 637,671 - SMc02270 0.65 +2.0 637,671 - SMc02270 0.65 +1.4 637,763 + SMc02270 0.71 +2.0 637,764 - SMc02270 0.71 +1.4 637,769 + SMc02270 0.71 +2.2 637,769 + SMc02270 0.71 +1.8 637,769 + SMc02270 0.71 +2.2 637,769 + SMc02270 0.71 +1.3 637,769 + SMc02270 0.71 +1.8 637,769 + SMc02270 0.71 +1.7 637,769 + SMc02270 0.71 +1.1 637,770 - SMc02270 0.71 +1.9 637,770 - SMc02270 0.71 +1.7 637,793 + SMc02270 0.73 +1.5 637,793 + SMc02270 0.73 +1.7 637,793 + SMc02270 0.73 +2.1 637,794 - SMc02270 0.73 +1.8 637,838 + SMc02270 0.75 +1.9 637,838 + SMc02270 0.75 +1.6 637,839 - SMc02270 0.75 +2.4 637,853 + SMc02270 0.76 +1.8 637,854 - SMc02270 0.76 +1.8 637,976 + SMc02270 0.84 +1.9 637,976 + SMc02270 0.84 +1.9 638,126 + +2.0 638,127 - +1.9 638,153 + +0.6 638,153 + +1.6 638,271 + +1.9 638,271 + +1.8 638,278 + +1.5 638,278 + +1.4 638,282 - +1.4 638,282 - +1.0 638,282 - +2.0 638,282 - -0.3 638,282 - +0.9 638,506 + SMc02271 0.24 +1.6 638,507 - SMc02271 0.24 +1.3 638,667 + SMc02271 0.44 +1.7 638,667 + SMc02271 0.44 +0.7 638,668 - SMc02271 0.44 +1.5 638,670 - SMc02271 0.44 +2.1 638,675 + SMc02271 0.45 +1.7 638,675 + SMc02271 0.45 +1.4 638,676 - SMc02271 0.45 +1.4
Or see this region's nucleotide sequence