Strain Fitness in Sinorhizobium meliloti 1021 around SMc02091

Experiment: Cobalt chloride 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc02093 and SMc02092 overlap by 8 nucleotidesSMc02092 and SMc02091 are separated by 2 nucleotidesSMc02091 and SMc02090 overlap by 1 nucleotidesSMc02090 and SMc02089 overlap by 4 nucleotides SMc02093: SMc02093 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, at 1,616,710 to 1,617,774 SMc02093 SMc02092: SMc02092 - (3R)-hydroxymyristoyl-ACP dehydratase, at 1,617,767 to 1,618,231 SMc02092 SMc02091: SMc02091 - UDP-N-acetylglucosamine acyltransferase, at 1,618,234 to 1,619,046 SMc02091 SMc02090: SMc02090 - hypothetical protein, at 1,619,046 to 1,619,933 SMc02090 SMc02089: SMc02089 - lipid-A-disaccharide synthase, at 1,619,930 to 1,621,099 SMc02089 Position (kb) 1618 1619 1620Strain fitness (log2 ratio) -1 0 1at 1619.945 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM
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1,619,945 + -0.1

Or see this region's nucleotide sequence