Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01848 and SMc01847 overlap by 4 nucleotides SMc01847 and SMc01846 are separated by 161 nucleotides SMc01846 and SMc01845 are separated by 136 nucleotides
SMc01848: SMc01848 - hypothetical protein, at 2,366,015 to 2,367,265
SMc01848
SMc01847: SMc01847 - methyltransferase, at 2,367,262 to 2,367,927
SMc01847
SMc01846: SMc01846 - hydrolase glycosidase, at 2,368,089 to 2,368,874
SMc01846
SMc01845: SMc01845 - transglycosylase transmembrane protein, at 2,369,011 to 2,370,228
SMc01845
Position (kb)
2368
2369 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.179 kb on + strand at 2367.180 kb on - strand at 2367.180 kb on - strand at 2367.180 kb on - strand at 2367.180 kb on - strand at 2367.180 kb on - strand at 2367.180 kb on - strand at 2367.231 kb on - strand at 2367.317 kb on - strand at 2367.317 kb on - strand at 2367.338 kb on - strand, within SMc01847 at 2367.358 kb on + strand, within SMc01847 at 2367.498 kb on + strand, within SMc01847 at 2367.499 kb on - strand, within SMc01847 at 2367.890 kb on - strand at 2367.890 kb on - strand at 2367.926 kb on - strand at 2367.972 kb on - strand at 2367.991 kb on + strand at 2367.991 kb on + strand at 2367.991 kb on + strand at 2368.374 kb on + strand, within SMc01846 at 2368.374 kb on + strand, within SMc01846 at 2368.375 kb on - strand, within SMc01846 at 2368.614 kb on + strand, within SMc01846 at 2368.635 kb on + strand, within SMc01846 at 2368.635 kb on + strand, within SMc01846 at 2368.636 kb on - strand, within SMc01846 at 2368.636 kb on - strand, within SMc01846 at 2368.636 kb on - strand, within SMc01846 at 2368.687 kb on - strand, within SMc01846 at 2368.731 kb on + strand, within SMc01846 at 2368.731 kb on + strand, within SMc01846 at 2368.731 kb on + strand, within SMc01846 at 2368.731 kb on + strand, within SMc01846 at 2368.732 kb on - strand, within SMc01846 at 2368.761 kb on + strand, within SMc01846 at 2368.761 kb on + strand, within SMc01846 at 2368.762 kb on - strand, within SMc01846 at 2368.763 kb on + strand, within SMc01846 at 2368.763 kb on + strand, within SMc01846 at 2368.763 kb on + strand, within SMc01846 at 2368.764 kb on - strand, within SMc01846 at 2368.764 kb on - strand, within SMc01846 at 2368.872 kb on + strand at 2368.920 kb on + strand at 2369.010 kb on - strand at 2369.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 2,367,179 + +2.0 2,367,179 + +1.8 2,367,179 + +1.1 2,367,179 + +2.3 2,367,179 + +1.8 2,367,179 + +1.6 2,367,179 + +2.7 2,367,180 - +2.3 2,367,180 - +0.8 2,367,180 - +2.6 2,367,180 - +2.4 2,367,180 - +2.6 2,367,180 - +1.9 2,367,231 - +0.5 2,367,317 - +0.6 2,367,317 - +1.1 2,367,338 - SMc01847 0.11 +1.6 2,367,358 + SMc01847 0.14 +0.6 2,367,498 + SMc01847 0.35 +1.0 2,367,499 - SMc01847 0.36 +0.7 2,367,890 - +0.5 2,367,890 - +0.8 2,367,926 - -0.4 2,367,972 - -0.4 2,367,991 + +1.3 2,367,991 + -0.4 2,367,991 + -0.6 2,368,374 + SMc01846 0.36 +1.0 2,368,374 + SMc01846 0.36 -0.7 2,368,375 - SMc01846 0.36 +0.9 2,368,614 + SMc01846 0.67 +1.0 2,368,635 + SMc01846 0.69 +0.9 2,368,635 + SMc01846 0.69 +0.6 2,368,636 - SMc01846 0.70 +0.6 2,368,636 - SMc01846 0.70 +1.4 2,368,636 - SMc01846 0.70 +1.0 2,368,687 - SMc01846 0.76 +0.6 2,368,731 + SMc01846 0.82 +2.0 2,368,731 + SMc01846 0.82 +0.8 2,368,731 + SMc01846 0.82 +1.2 2,368,731 + SMc01846 0.82 +1.4 2,368,732 - SMc01846 0.82 +0.9 2,368,761 + SMc01846 0.85 -0.5 2,368,761 + SMc01846 0.85 +1.7 2,368,762 - SMc01846 0.86 +0.3 2,368,763 + SMc01846 0.86 +2.1 2,368,763 + SMc01846 0.86 +1.4 2,368,763 + SMc01846 0.86 +1.3 2,368,764 - SMc01846 0.86 +0.8 2,368,764 - SMc01846 0.86 +0.2 2,368,872 + +1.1 2,368,920 + +0.7 2,369,010 - -0.9 2,369,010 - -3.4
Or see this region's nucleotide sequence