Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00058 and SMc00118 are separated by 203 nucleotides SMc00118 and SMc00456 are separated by 187 nucleotides SMc00456 and SMc00059 are separated by 514 nucleotides
SMc00058: SMc00058 - transcriptional regulator, at 1,091,371 to 1,091,802
SMc00058
SMc00118: SMc00118 - hypothetical protein, at 1,092,006 to 1,092,428
SMc00118
SMc00456: SMc00456 - hypothetical protein, at 1,092,616 to 1,093,053
SMc00456
SMc00059: SMc00059 - sensor histidine kinase, at 1,093,568 to 1,095,145
SMc00059
Position (kb)
1092
1093
1094 Strain fitness (log2 ratio)
-2
-1
0
1 at 1091.930 kb on - strand at 1092.432 kb on - strand at 1092.432 kb on - strand at 1092.432 kb on - strand at 1092.432 kb on - strand at 1092.432 kb on - strand at 1092.525 kb on - strand at 1092.525 kb on - strand at 1092.617 kb on + strand at 1092.618 kb on - strand at 1092.618 kb on - strand at 1092.666 kb on + strand, within SMc00456 at 1092.667 kb on - strand, within SMc00456 at 1092.803 kb on + strand, within SMc00456 at 1092.886 kb on + strand, within SMc00456 at 1092.886 kb on + strand, within SMc00456 at 1092.901 kb on + strand, within SMc00456 at 1092.901 kb on + strand, within SMc00456 at 1092.901 kb on + strand, within SMc00456 at 1092.902 kb on - strand, within SMc00456 at 1092.902 kb on - strand, within SMc00456 at 1092.902 kb on - strand, within SMc00456 at 1092.905 kb on + strand, within SMc00456 at 1092.905 kb on + strand, within SMc00456 at 1092.906 kb on - strand, within SMc00456 at 1093.096 kb on + strand at 1093.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 1,091,930 - -0.8 1,092,432 - +0.2 1,092,432 - +0.6 1,092,432 - +1.5 1,092,432 - -0.3 1,092,432 - -1.0 1,092,525 - +0.9 1,092,525 - +0.2 1,092,617 + -0.5 1,092,618 - -1.0 1,092,618 - -0.4 1,092,666 + SMc00456 0.11 -0.2 1,092,667 - SMc00456 0.12 -1.1 1,092,803 + SMc00456 0.43 -1.3 1,092,886 + SMc00456 0.62 -0.1 1,092,886 + SMc00456 0.62 -1.2 1,092,901 + SMc00456 0.65 -1.8 1,092,901 + SMc00456 0.65 -1.5 1,092,901 + SMc00456 0.65 -0.6 1,092,902 - SMc00456 0.65 -1.0 1,092,902 - SMc00456 0.65 -1.0 1,092,902 - SMc00456 0.65 -0.3 1,092,905 + SMc00456 0.66 -0.6 1,092,905 + SMc00456 0.66 -1.2 1,092,906 - SMc00456 0.66 -0.2 1,093,096 + -1.0 1,093,097 - +0.6
Or see this region's nucleotide sequence