Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21277

Experiment: Cobalt chloride 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSM_b21277 and SM_b21278 overlap by 4 nucleotides SM_b21277: SM_b21277 - inosine-uridine preferring nucleoside hydrolase, at 850,786 to 851,709 _b21277 SM_b21278: SM_b21278 - adenine deaminase, at 851,706 to 853,487 _b21278 Position (kb) 850 851 852Strain fitness (log2 ratio) -1 0 1at 849.796 kb on + strandat 849.936 kb on + strandat 849.937 kb on - strandat 849.960 kb on + strandat 849.961 kb on - strandat 850.009 kb on + strandat 850.010 kb on - strandat 850.423 kb on + strandat 850.423 kb on + strandat 850.423 kb on + strandat 850.424 kb on - strandat 850.424 kb on - strandat 850.424 kb on - strandat 850.424 kb on - strandat 850.425 kb on + strandat 850.648 kb on + strandat 850.648 kb on + strandat 850.660 kb on - strandat 851.013 kb on + strand, within SM_b21277at 851.014 kb on - strand, within SM_b21277at 851.014 kb on - strand, within SM_b21277at 851.158 kb on - strand, within SM_b21277at 851.253 kb on + strand, within SM_b21277at 851.253 kb on + strand, within SM_b21277at 851.444 kb on - strand, within SM_b21277at 851.488 kb on + strand, within SM_b21277at 851.488 kb on + strand, within SM_b21277at 851.488 kb on + strand, within SM_b21277at 851.489 kb on - strand, within SM_b21277at 851.489 kb on - strand, within SM_b21277at 851.489 kb on - strand, within SM_b21277at 851.635 kb on + strandat 851.636 kb on - strandat 851.636 kb on - strandat 851.649 kb on - strandat 851.713 kb on + strandat 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.972 kb on + strand, within SM_b21278at 851.973 kb on - strandat 851.973 kb on - strand, within SM_b21278at 851.973 kb on - strand, within SM_b21278at 851.973 kb on - strand, within SM_b21278at 851.973 kb on - strand, within SM_b21278at 851.973 kb on - strand, within SM_b21278at 852.010 kb on - strand, within SM_b21278at 852.010 kb on - strand, within SM_b21278at 852.521 kb on + strand, within SM_b21278at 852.557 kb on + strand, within SM_b21278

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM
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849,796 + +0.5
849,936 + +0.4
849,937 - +1.0
849,960 + +0.2
849,961 - +0.0
850,009 + +0.7
850,010 - -0.2
850,423 + -0.5
850,423 + -0.9
850,423 + -0.7
850,424 - +0.0
850,424 - +0.3
850,424 - +0.5
850,424 - +0.2
850,425 + -0.5
850,648 + +0.1
850,648 + -0.1
850,660 - -0.2
851,013 + SM_b21277 0.25 -0.6
851,014 - SM_b21277 0.25 -0.2
851,014 - SM_b21277 0.25 +0.1
851,158 - SM_b21277 0.40 -0.1
851,253 + SM_b21277 0.51 -1.0
851,253 + SM_b21277 0.51 +0.0
851,444 - SM_b21277 0.71 -0.4
851,488 + SM_b21277 0.76 -0.0
851,488 + SM_b21277 0.76 -0.6
851,488 + SM_b21277 0.76 -0.3
851,489 - SM_b21277 0.76 -1.2
851,489 - SM_b21277 0.76 -0.8
851,489 - SM_b21277 0.76 -0.1
851,635 + +0.1
851,636 - -0.6
851,636 - +1.1
851,649 - +0.5
851,713 + -0.2
851,972 + SM_b21278 0.15 +1.2
851,972 + SM_b21278 0.15 -0.4
851,972 + SM_b21278 0.15 -0.1
851,972 + SM_b21278 0.15 -0.0
851,972 + SM_b21278 0.15 -0.4
851,972 + SM_b21278 0.15 +0.4
851,972 + SM_b21278 0.15 +0.5
851,972 + SM_b21278 0.15 +0.2
851,972 + SM_b21278 0.15 +0.4
851,973 - +0.6
851,973 - SM_b21278 0.15 -0.3
851,973 - SM_b21278 0.15 +0.9
851,973 - SM_b21278 0.15 +0.3
851,973 - SM_b21278 0.15 +0.4
851,973 - SM_b21278 0.15 +0.6
852,010 - SM_b21278 0.17 +1.2
852,010 - SM_b21278 0.17 +0.6
852,521 + SM_b21278 0.46 +0.2
852,557 + SM_b21278 0.48 -0.1

Or see this region's nucleotide sequence