Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21057 and SM_b21058 are separated by 52 nucleotides SM_b21058 and SM_b21059 are separated by 23 nucleotides SM_b21059 and SM_b21060 are separated by 4 nucleotides SM_b21060 and SM_b21061 are separated by 22 nucleotides
SM_b21057: SM_b21057 - hypothetical protein, at 691,767 to 692,645
_b21057
SM_b21058: SM_b21058 - glucose-1-phosphate cytidylyltransferase, at 692,698 to 692,919
_b21058
SM_b21059: SM_b21059 - glucose-1-phosphate cytidylyltransferase, at 692,943 to 693,467
_b21059
SM_b21060: SM_b21060 - sugar nucleotide epimerase dehydratase, at 693,472 to 694,521
_b21060
SM_b21061: SM_b21061 - NDP-hexose 3-C-methyltransferase, at 694,544 to 695,791
_b21061
Position (kb) 693
694
695 Strain fitness (log2 ratio) -2
-1
0
1
2 at 692.531 kb on + strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.532 kb on - strand, within SM_b21057 at 692.648 kb on + strand at 692.648 kb on + strand at 692.710 kb on - strand at 692.710 kb on - strand at 692.818 kb on + strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.872 kb on + strand, within SM_b21058 at 692.897 kb on - strand at 692.897 kb on - strand at 693.057 kb on - strand, within SM_b21059 at 693.288 kb on + strand, within SM_b21059 at 693.289 kb on - strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.487 kb on - strand at 693.502 kb on + strand at 693.503 kb on - strand at 693.503 kb on - strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.826 kb on + strand, within SM_b21060 at 693.827 kb on - strand, within SM_b21060 at 693.827 kb on - strand, within SM_b21060 at 693.886 kb on + strand, within SM_b21060 at 693.887 kb on - strand, within SM_b21060 at 693.951 kb on + strand, within SM_b21060 at 693.951 kb on + strand, within SM_b21060 at 693.952 kb on - strand, within SM_b21060 at 693.976 kb on + strand, within SM_b21060 at 694.055 kb on - strand, within SM_b21060 at 694.105 kb on - strand, within SM_b21060 at 694.105 kb on - strand, within SM_b21060 at 694.117 kb on + strand, within SM_b21060 at 694.117 kb on + strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.120 kb on - strand, within SM_b21060 at 694.120 kb on - strand, within SM_b21060 at 694.192 kb on + strand, within SM_b21060 at 694.192 kb on + strand, within SM_b21060 at 694.193 kb on - strand, within SM_b21060 at 694.303 kb on + strand, within SM_b21060 at 694.304 kb on - strand, within SM_b21060 at 694.370 kb on - strand, within SM_b21060 at 694.370 kb on - strand, within SM_b21060 at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.443 kb on - strand at 694.443 kb on - strand at 694.481 kb on + strand at 694.481 kb on + strand at 694.501 kb on - strand at 694.519 kb on + strand at 694.571 kb on - strand at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.788 kb on - strand, within SM_b21061 at 694.813 kb on - strand, within SM_b21061 at 694.919 kb on + strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.989 kb on + strand, within SM_b21061 at 695.126 kb on - strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.234 kb on + strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.254 kb on - strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.333 kb on + strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.407 kb on + strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.418 kb on - strand, within SM_b21061
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 692,531 + SM_b21057 0.87 -0.4 692,531 + SM_b21057 0.87 -0.1 692,532 - SM_b21057 0.87 -1.0 692,648 + -0.9 692,648 + +0.3 692,710 - +0.2 692,710 - -0.4 692,818 + SM_b21058 0.54 +0.7 692,819 - SM_b21058 0.55 -0.1 692,819 - SM_b21058 0.55 -0.1 692,872 + SM_b21058 0.78 +0.9 692,897 - -0.3 692,897 - -0.2 693,057 - SM_b21059 0.22 -0.3 693,288 + SM_b21059 0.66 +0.9 693,289 - SM_b21059 0.66 -0.2 693,395 + SM_b21059 0.86 +0.3 693,395 + SM_b21059 0.86 -0.1 693,396 - SM_b21059 0.86 +0.1 693,396 - SM_b21059 0.86 -1.7 693,396 - SM_b21059 0.86 +0.3 693,487 - +0.0 693,502 + +0.1 693,503 - +0.5 693,503 - +0.5 693,506 + -0.0 693,506 + -0.5 693,506 + +0.7 693,506 + +0.1 693,506 + +0.9 693,506 + -0.6 693,507 - -1.1 693,507 - -0.2 693,507 - -0.4 693,507 - +0.6 693,677 + SM_b21060 0.20 +0.2 693,677 + SM_b21060 0.20 +0.0 693,677 + SM_b21060 0.20 +0.2 693,677 + SM_b21060 0.20 +1.1 693,678 - SM_b21060 0.20 +0.2 693,678 - SM_b21060 0.20 +0.3 693,678 - SM_b21060 0.20 -0.1 693,826 + SM_b21060 0.34 -0.7 693,827 - SM_b21060 0.34 +0.4 693,827 - SM_b21060 0.34 +0.4 693,886 + SM_b21060 0.39 -0.3 693,887 - SM_b21060 0.40 +0.6 693,951 + SM_b21060 0.46 -0.3 693,951 + SM_b21060 0.46 -0.2 693,952 - SM_b21060 0.46 -0.0 693,976 + SM_b21060 0.48 +0.9 694,055 - SM_b21060 0.56 +1.3 694,105 - SM_b21060 0.60 +0.0 694,105 - SM_b21060 0.60 +0.4 694,117 + SM_b21060 0.61 -1.9 694,117 + SM_b21060 0.61 -0.7 694,118 - SM_b21060 0.62 -0.5 694,118 - SM_b21060 0.62 -0.4 694,118 - SM_b21060 0.62 +1.8 694,120 - SM_b21060 0.62 -0.3 694,120 - SM_b21060 0.62 -0.9 694,192 + SM_b21060 0.69 +0.0 694,192 + SM_b21060 0.69 +0.4 694,193 - SM_b21060 0.69 -0.1 694,303 + SM_b21060 0.79 +0.3 694,304 - SM_b21060 0.79 -0.5 694,370 - SM_b21060 0.86 -1.3 694,370 - SM_b21060 0.86 -0.4 694,442 + +0.2 694,442 + -0.4 694,442 + -0.2 694,442 + +0.1 694,442 + -0.0 694,443 - +0.0 694,443 - +0.4 694,481 + +0.7 694,481 + -1.1 694,501 - -0.6 694,519 + +0.3 694,571 - +0.4 694,787 + SM_b21061 0.19 +0.1 694,787 + SM_b21061 0.19 +0.7 694,787 + SM_b21061 0.19 -0.4 694,787 + SM_b21061 0.19 +0.1 694,788 - SM_b21061 0.20 +1.1 694,813 - SM_b21061 0.22 -0.2 694,919 + SM_b21061 0.30 -0.7 694,920 - SM_b21061 0.30 +1.3 694,920 - SM_b21061 0.30 -0.5 694,989 + SM_b21061 0.36 +0.0 695,126 - SM_b21061 0.47 -0.7 695,127 + SM_b21061 0.47 +0.3 695,127 + SM_b21061 0.47 -0.0 695,174 + SM_b21061 0.50 -0.9 695,174 + SM_b21061 0.50 -0.3 695,174 + SM_b21061 0.50 -0.4 695,175 - SM_b21061 0.51 +0.5 695,175 - SM_b21061 0.51 -0.6 695,175 - SM_b21061 0.51 -0.7 695,234 + SM_b21061 0.55 +1.0 695,235 - SM_b21061 0.55 -0.1 695,235 - SM_b21061 0.55 -0.3 695,254 - SM_b21061 0.57 -0.6 695,282 + SM_b21061 0.59 -0.4 695,282 + SM_b21061 0.59 -0.2 695,333 + SM_b21061 0.63 -0.0 695,334 - SM_b21061 0.63 -0.4 695,334 - SM_b21061 0.63 -0.6 695,407 + SM_b21061 0.69 -0.3 695,408 - SM_b21061 0.69 -0.2 695,408 - SM_b21061 0.69 -0.4 695,418 - SM_b21061 0.70 +0.4
Or see this region's nucleotide sequence