Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20457 and SM_b20458 are separated by 359 nucleotides SM_b20458 and SM_b20459 overlap by 1 nucleotides SM_b20459 and SM_b20460 overlap by 4 nucleotides
SM_b20457: SM_b20457 - transcriptional regulator transcription regulator protein, at 468,904 to 470,052
_b20457
SM_b20458: SM_b20458 - dTDP-glucose 4,6-dehydratase, at 470,412 to 471,458
_b20458
SM_b20459: SM_b20459 - UDP-glucose 4-epimerase, at 471,458 to 472,444
_b20459
SM_b20460: SM_b20460 - cellulose synthase, at 472,441 to 474,306
_b20460
Position (kb) 470
471
472 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 469.440 kb on + strand, within SM_b20457 at 469.440 kb on + strand, within SM_b20457 at 469.440 kb on + strand, within SM_b20457 at 469.441 kb on - strand, within SM_b20457 at 469.442 kb on + strand, within SM_b20457 at 469.442 kb on + strand, within SM_b20457 at 469.443 kb on - strand, within SM_b20457 at 469.529 kb on + strand, within SM_b20457 at 469.529 kb on + strand, within SM_b20457 at 469.529 kb on + strand, within SM_b20457 at 469.577 kb on + strand, within SM_b20457 at 469.727 kb on + strand, within SM_b20457 at 469.731 kb on + strand, within SM_b20457 at 469.731 kb on + strand, within SM_b20457 at 469.731 kb on + strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.732 kb on - strand, within SM_b20457 at 469.854 kb on + strand, within SM_b20457 at 469.855 kb on - strand, within SM_b20457 at 469.855 kb on - strand, within SM_b20457 at 469.872 kb on + strand, within SM_b20457 at 469.919 kb on - strand, within SM_b20457 at 469.992 kb on + strand at 469.992 kb on + strand at 469.993 kb on - strand at 470.096 kb on + strand at 470.096 kb on + strand at 470.204 kb on + strand at 470.204 kb on + strand at 470.205 kb on - strand at 470.205 kb on - strand at 470.206 kb on + strand at 470.207 kb on - strand at 470.249 kb on - strand at 470.286 kb on - strand at 470.588 kb on + strand, within SM_b20458 at 470.589 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.703 kb on - strand, within SM_b20458 at 470.733 kb on + strand, within SM_b20458 at 470.734 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 471.015 kb on + strand, within SM_b20458 at 471.089 kb on + strand, within SM_b20458 at 471.089 kb on + strand, within SM_b20458 at 471.099 kb on + strand, within SM_b20458 at 471.099 kb on + strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.405 kb on + strand at 471.473 kb on - strand at 471.473 kb on - strand at 471.498 kb on - strand at 471.554 kb on + strand at 471.555 kb on - strand at 471.616 kb on + strand, within SM_b20459 at 471.617 kb on - strand, within SM_b20459 at 471.617 kb on - strand, within SM_b20459 at 471.732 kb on - strand, within SM_b20459 at 471.824 kb on + strand at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.884 kb on + strand, within SM_b20459 at 471.884 kb on + strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.926 kb on + strand, within SM_b20459 at 471.927 kb on - strand, within SM_b20459 at 471.965 kb on + strand, within SM_b20459 at 472.123 kb on - strand, within SM_b20459 at 472.130 kb on + strand, within SM_b20459 at 472.131 kb on - strand, within SM_b20459 at 472.131 kb on - strand, within SM_b20459 at 472.132 kb on + strand, within SM_b20459 at 472.133 kb on - strand, within SM_b20459 at 472.133 kb on - strand at 472.133 kb on - strand, within SM_b20459 at 472.239 kb on + strand, within SM_b20459 at 472.239 kb on + strand, within SM_b20459 at 472.270 kb on + strand, within SM_b20459
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 469,440 + SM_b20457 0.47 -0.4 469,440 + SM_b20457 0.47 +1.0 469,440 + SM_b20457 0.47 +0.1 469,441 - SM_b20457 0.47 +0.0 469,442 + SM_b20457 0.47 -0.1 469,442 + SM_b20457 0.47 +0.3 469,443 - SM_b20457 0.47 +0.3 469,529 + SM_b20457 0.54 +0.6 469,529 + SM_b20457 0.54 -0.2 469,529 + SM_b20457 0.54 -0.1 469,577 + SM_b20457 0.59 +0.1 469,727 + SM_b20457 0.72 -0.3 469,731 + SM_b20457 0.72 -0.2 469,731 + SM_b20457 0.72 -0.1 469,731 + SM_b20457 0.72 +0.5 469,732 - SM_b20457 0.72 +0.2 469,732 - SM_b20457 0.72 -0.7 469,732 - SM_b20457 0.72 +0.2 469,732 - SM_b20457 0.72 -0.5 469,732 - SM_b20457 0.72 -0.1 469,732 - SM_b20457 0.72 +0.0 469,854 + SM_b20457 0.83 +0.0 469,855 - SM_b20457 0.83 +0.7 469,855 - SM_b20457 0.83 -0.3 469,872 + SM_b20457 0.84 +0.2 469,919 - SM_b20457 0.88 +0.2 469,992 + -0.0 469,992 + -2.4 469,993 - +1.2 470,096 + +1.3 470,096 + +3.3 470,204 + +0.3 470,204 + -0.2 470,205 - +0.9 470,205 - -1.1 470,206 + +2.3 470,207 - +0.8 470,249 - -0.0 470,286 - -0.9 470,588 + SM_b20458 0.17 -0.3 470,589 - SM_b20458 0.17 -0.2 470,701 - SM_b20458 0.28 +1.7 470,701 - SM_b20458 0.28 -2.3 470,701 - SM_b20458 0.28 -0.4 470,703 - SM_b20458 0.28 -0.3 470,733 + SM_b20458 0.31 -1.1 470,734 - SM_b20458 0.31 -0.7 470,884 - SM_b20458 0.45 -0.1 470,884 - SM_b20458 0.45 -0.3 470,884 - SM_b20458 0.45 -0.6 470,884 - SM_b20458 0.45 -0.5 470,923 - SM_b20458 0.49 -0.5 470,923 - SM_b20458 0.49 -0.2 470,923 - SM_b20458 0.49 -0.7 471,015 + SM_b20458 0.58 +1.0 471,089 + SM_b20458 0.65 -0.1 471,089 + SM_b20458 0.65 +0.1 471,099 + SM_b20458 0.66 -0.9 471,099 + SM_b20458 0.66 -0.2 471,100 - SM_b20458 0.66 +1.1 471,100 - SM_b20458 0.66 +0.5 471,100 - SM_b20458 0.66 -1.0 471,405 + -0.1 471,473 - +1.1 471,473 - -0.1 471,498 - -0.0 471,554 + -0.1 471,555 - -0.1 471,616 + SM_b20459 0.16 -0.3 471,617 - SM_b20459 0.16 -0.1 471,617 - SM_b20459 0.16 +0.3 471,732 - SM_b20459 0.28 -2.5 471,824 + +1.3 471,824 + SM_b20459 0.37 +0.8 471,824 + SM_b20459 0.37 -0.4 471,824 + SM_b20459 0.37 -0.4 471,824 + SM_b20459 0.37 -0.7 471,824 + SM_b20459 0.37 -0.1 471,824 + SM_b20459 0.37 -0.4 471,825 - SM_b20459 0.37 +1.2 471,825 - SM_b20459 0.37 -0.1 471,825 - SM_b20459 0.37 -0.5 471,884 + SM_b20459 0.43 -0.1 471,884 + SM_b20459 0.43 -1.5 471,890 - SM_b20459 0.44 -0.4 471,890 - SM_b20459 0.44 -0.1 471,890 - SM_b20459 0.44 +1.0 471,890 - SM_b20459 0.44 -0.8 471,926 + SM_b20459 0.47 +0.3 471,927 - SM_b20459 0.48 +0.4 471,965 + SM_b20459 0.51 -0.4 472,123 - SM_b20459 0.67 -0.1 472,130 + SM_b20459 0.68 +0.2 472,131 - SM_b20459 0.68 +0.5 472,131 - SM_b20459 0.68 -0.1 472,132 + SM_b20459 0.68 -0.1 472,133 - SM_b20459 0.68 -0.0 472,133 - +0.8 472,133 - SM_b20459 0.68 +0.7 472,239 + SM_b20459 0.79 -0.2 472,239 + SM_b20459 0.79 -0.4 472,270 + SM_b20459 0.82 +0.5
Or see this region's nucleotide sequence