Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20381 and SM_b20382 overlap by 4 nucleotides SM_b20382 and SM_b20383 are separated by 125 nucleotides SM_b20383 and SM_b20384 are separated by 105 nucleotides
SM_b20381: SM_b20381 - ABC transporter permease, at 392,436 to 393,266
_b20381
SM_b20382: SM_b20382 - ABC transporter permease, at 393,263 to 394,114
_b20382
SM_b20383: SM_b20383 - ABC transporter substrate-binding protein, at 394,240 to 395,313
_b20383
SM_b20384: SM_b20384 - dipeptidase, at 395,419 to 396,390
_b20384
Position (kb) 394
395
396 Strain fitness (log2 ratio) -1
0
1
2 at 393.312 kb on + strand at 393.312 kb on + strand at 393.313 kb on - strand at 393.313 kb on - strand at 393.313 kb on - strand at 393.404 kb on + strand, within SM_b20382 at 393.404 kb on + strand, within SM_b20382 at 393.405 kb on - strand, within SM_b20382 at 393.459 kb on + strand, within SM_b20382 at 393.459 kb on + strand, within SM_b20382 at 393.459 kb on + strand, within SM_b20382 at 393.459 kb on + strand, within SM_b20382 at 393.460 kb on - strand, within SM_b20382 at 393.460 kb on - strand, within SM_b20382 at 393.528 kb on + strand, within SM_b20382 at 393.585 kb on + strand at 393.585 kb on + strand, within SM_b20382 at 393.585 kb on + strand, within SM_b20382 at 393.586 kb on - strand, within SM_b20382 at 393.586 kb on - strand, within SM_b20382 at 393.641 kb on - strand, within SM_b20382 at 393.768 kb on + strand, within SM_b20382 at 393.769 kb on - strand, within SM_b20382 at 393.769 kb on - strand, within SM_b20382 at 393.783 kb on + strand, within SM_b20382 at 393.784 kb on - strand, within SM_b20382 at 393.924 kb on + strand, within SM_b20382 at 393.924 kb on + strand, within SM_b20382 at 393.924 kb on + strand, within SM_b20382 at 393.924 kb on + strand, within SM_b20382 at 394.014 kb on + strand, within SM_b20382 at 394.015 kb on - strand, within SM_b20382 at 394.196 kb on + strand at 394.241 kb on + strand at 394.241 kb on + strand at 394.563 kb on + strand, within SM_b20383 at 394.564 kb on - strand, within SM_b20383 at 394.722 kb on - strand, within SM_b20383 at 394.722 kb on - strand, within SM_b20383 at 394.877 kb on + strand, within SM_b20383 at 394.878 kb on - strand, within SM_b20383 at 394.878 kb on - strand, within SM_b20383 at 395.104 kb on + strand, within SM_b20383 at 395.105 kb on - strand, within SM_b20383 at 395.219 kb on + strand at 395.219 kb on + strand at 395.352 kb on + strand at 395.352 kb on + strand at 395.352 kb on + strand at 395.353 kb on - strand at 395.353 kb on - strand at 395.531 kb on - strand, within SM_b20384 at 395.531 kb on - strand, within SM_b20384 at 395.601 kb on - strand, within SM_b20384 at 395.601 kb on - strand, within SM_b20384 at 395.771 kb on - strand, within SM_b20384 at 395.844 kb on + strand, within SM_b20384 at 395.850 kb on + strand, within SM_b20384 at 396.146 kb on + strand, within SM_b20384
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 393,312 + -0.1 393,312 + -0.2 393,313 - +0.1 393,313 - +0.1 393,313 - -1.6 393,404 + SM_b20382 0.17 +2.6 393,404 + SM_b20382 0.17 -0.4 393,405 - SM_b20382 0.17 -0.4 393,459 + SM_b20382 0.23 -0.0 393,459 + SM_b20382 0.23 +0.2 393,459 + SM_b20382 0.23 +0.3 393,459 + SM_b20382 0.23 -0.2 393,460 - SM_b20382 0.23 +0.0 393,460 - SM_b20382 0.23 +0.5 393,528 + SM_b20382 0.31 -0.5 393,585 + +2.1 393,585 + SM_b20382 0.38 -0.9 393,585 + SM_b20382 0.38 -0.4 393,586 - SM_b20382 0.38 +0.4 393,586 - SM_b20382 0.38 -1.5 393,641 - SM_b20382 0.44 -0.6 393,768 + SM_b20382 0.59 +0.1 393,769 - SM_b20382 0.59 +0.9 393,769 - SM_b20382 0.59 -0.6 393,783 + SM_b20382 0.61 -0.6 393,784 - SM_b20382 0.61 -0.6 393,924 + SM_b20382 0.78 +0.4 393,924 + SM_b20382 0.78 -0.2 393,924 + SM_b20382 0.78 +0.0 393,924 + SM_b20382 0.78 -0.1 394,014 + SM_b20382 0.88 +0.2 394,015 - SM_b20382 0.88 -0.7 394,196 + -1.1 394,241 + -0.4 394,241 + -0.1 394,563 + SM_b20383 0.30 -0.4 394,564 - SM_b20383 0.30 -0.0 394,722 - SM_b20383 0.45 -0.5 394,722 - SM_b20383 0.45 -0.6 394,877 + SM_b20383 0.59 -0.1 394,878 - SM_b20383 0.59 -0.4 394,878 - SM_b20383 0.59 -0.7 395,104 + SM_b20383 0.80 +0.0 395,105 - SM_b20383 0.81 -0.8 395,219 + -0.2 395,219 + -0.3 395,352 + +0.3 395,352 + +0.0 395,352 + +0.1 395,353 - -0.4 395,353 - +0.0 395,531 - SM_b20384 0.12 -1.2 395,531 - SM_b20384 0.12 -0.0 395,601 - SM_b20384 0.19 +0.1 395,601 - SM_b20384 0.19 +0.4 395,771 - SM_b20384 0.36 +1.4 395,844 + SM_b20384 0.44 -0.2 395,850 + SM_b20384 0.44 -0.1 396,146 + SM_b20384 0.75 -0.2
Or see this region's nucleotide sequence