Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_614 and Pf1N1B4_615 are separated by 35 nucleotides Pf1N1B4_615 and Pf1N1B4_616 are separated by 69 nucleotides
Pf1N1B4_614 - Arginine/ornithine antiporter ArcD, at 709,753 to 711,180
_614
Pf1N1B4_615 - Arginine deiminase (EC 3.5.3.6), at 711,216 to 712,472
_615
Pf1N1B4_616 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 712,542 to 713,552
_616
Position (kb) 711
712
713 Strain fitness (log2 ratio) -1
0
1 at 710.816 kb on - strand, within Pf1N1B4_614 at 710.830 kb on + strand, within Pf1N1B4_614 at 710.861 kb on - strand, within Pf1N1B4_614 at 710.911 kb on + strand, within Pf1N1B4_614 at 710.912 kb on - strand at 710.912 kb on - strand, within Pf1N1B4_614 at 710.971 kb on + strand, within Pf1N1B4_614 at 710.971 kb on + strand, within Pf1N1B4_614 at 710.990 kb on - strand, within Pf1N1B4_614 at 711.031 kb on + strand, within Pf1N1B4_614 at 711.031 kb on + strand, within Pf1N1B4_614 at 711.123 kb on - strand at 711.123 kb on - strand at 711.214 kb on + strand at 711.237 kb on + strand at 711.756 kb on + strand, within Pf1N1B4_615 at 711.757 kb on - strand, within Pf1N1B4_615 at 712.344 kb on + strand at 712.344 kb on + strand, within Pf1N1B4_615 at 712.345 kb on - strand, within Pf1N1B4_615 at 712.345 kb on - strand, within Pf1N1B4_615 at 712.345 kb on - strand, within Pf1N1B4_615 at 712.467 kb on + strand at 712.468 kb on - strand at 712.608 kb on + strand at 712.609 kb on - strand at 712.647 kb on + strand, within Pf1N1B4_616 at 712.648 kb on - strand, within Pf1N1B4_616 at 712.648 kb on - strand, within Pf1N1B4_616 at 712.770 kb on + strand, within Pf1N1B4_616 at 712.770 kb on + strand, within Pf1N1B4_616 at 712.771 kb on - strand, within Pf1N1B4_616 at 712.771 kb on - strand, within Pf1N1B4_616
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 710,816 - Pf1N1B4_614 0.74 -1.1 710,830 + Pf1N1B4_614 0.75 -1.1 710,861 - Pf1N1B4_614 0.78 -0.3 710,911 + Pf1N1B4_614 0.81 +1.2 710,912 - +0.2 710,912 - Pf1N1B4_614 0.81 +0.9 710,971 + Pf1N1B4_614 0.85 -0.8 710,971 + Pf1N1B4_614 0.85 +0.9 710,990 - Pf1N1B4_614 0.87 +1.2 711,031 + Pf1N1B4_614 0.89 +1.2 711,031 + Pf1N1B4_614 0.89 +0.8 711,123 - +0.7 711,123 - +0.8 711,214 + -0.3 711,237 + -0.3 711,756 + Pf1N1B4_615 0.43 -0.1 711,757 - Pf1N1B4_615 0.43 +1.6 712,344 + +1.2 712,344 + Pf1N1B4_615 0.90 +1.1 712,345 - Pf1N1B4_615 0.90 +0.9 712,345 - Pf1N1B4_615 0.90 +0.2 712,345 - Pf1N1B4_615 0.90 +0.5 712,467 + +0.2 712,468 - +1.2 712,608 + -1.2 712,609 - -0.2 712,647 + Pf1N1B4_616 0.10 -0.8 712,648 - Pf1N1B4_616 0.10 -1.3 712,648 - Pf1N1B4_616 0.10 -0.3 712,770 + Pf1N1B4_616 0.23 +0.7 712,770 + Pf1N1B4_616 0.23 -1.2 712,771 - Pf1N1B4_616 0.23 -1.4 712,771 - Pf1N1B4_616 0.23 +0.5
Or see this region's nucleotide sequence