Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4972 and Pf1N1B4_4973 are separated by 114 nucleotides Pf1N1B4_4973 and Pf1N1B4_4974 are separated by 32 nucleotides Pf1N1B4_4974 and Pf1N1B4_4975 are separated by 826 nucleotides
Pf1N1B4_4972 - CELL PROCESSES; Adaptation; adaptations, atypical conditions, at 5,512,158 to 5,512,988
_4972
Pf1N1B4_4973 - hypothetical protein, at 5,513,103 to 5,513,387
_4973
Pf1N1B4_4974 - Protease subunit of ATP-dependent Clp proteases, at 5,513,420 to 5,513,977
_4974
Pf1N1B4_4975 - hypothetical protein, at 5,514,804 to 5,515,145
_4975
Position (kb) 5513
5514 Strain fitness (log2 ratio) -2
-1
0
1 at 5512.857 kb on + strand, within Pf1N1B4_4972 at 5512.857 kb on + strand, within Pf1N1B4_4972 at 5512.857 kb on + strand, within Pf1N1B4_4972 at 5512.993 kb on + strand at 5513.057 kb on - strand at 5513.095 kb on + strand at 5513.096 kb on - strand at 5513.167 kb on + strand, within Pf1N1B4_4973 at 5513.202 kb on + strand, within Pf1N1B4_4973 at 5513.203 kb on - strand, within Pf1N1B4_4973 at 5513.203 kb on - strand, within Pf1N1B4_4973 at 5513.205 kb on + strand, within Pf1N1B4_4973 at 5513.205 kb on + strand, within Pf1N1B4_4973 at 5513.258 kb on + strand, within Pf1N1B4_4973 at 5513.263 kb on - strand, within Pf1N1B4_4973 at 5513.263 kb on - strand, within Pf1N1B4_4973 at 5513.263 kb on - strand, within Pf1N1B4_4973 at 5513.263 kb on - strand, within Pf1N1B4_4973 at 5513.269 kb on + strand, within Pf1N1B4_4973 at 5513.270 kb on - strand, within Pf1N1B4_4973 at 5513.499 kb on - strand, within Pf1N1B4_4974 at 5513.634 kb on + strand, within Pf1N1B4_4974 at 5513.676 kb on + strand at 5513.821 kb on - strand, within Pf1N1B4_4974 at 5514.003 kb on + strand at 5514.024 kb on + strand at 5514.025 kb on - strand at 5514.084 kb on - strand at 5514.094 kb on + strand at 5514.096 kb on + strand at 5514.118 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.147 kb on + strand at 5514.220 kb on - strand at 5514.363 kb on + strand at 5514.558 kb on + strand at 5514.580 kb on + strand at 5514.580 kb on + strand at 5514.580 kb on + strand at 5514.580 kb on + strand at 5514.580 kb on + strand at 5514.580 kb on + strand at 5514.679 kb on + strand at 5514.679 kb on + strand at 5514.679 kb on + strand at 5514.679 kb on + strand at 5514.679 kb on + strand at 5514.679 kb on + strand at 5514.680 kb on - strand at 5514.691 kb on + strand at 5514.691 kb on + strand at 5514.691 kb on + strand at 5514.691 kb on + strand at 5514.695 kb on - strand at 5514.695 kb on - strand at 5514.814 kb on + strand at 5514.814 kb on + strand at 5514.814 kb on + strand at 5514.815 kb on - strand at 5514.815 kb on - strand at 5514.919 kb on - strand, within Pf1N1B4_4975
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 5,512,857 + Pf1N1B4_4972 0.84 -0.4 5,512,857 + Pf1N1B4_4972 0.84 -0.5 5,512,857 + Pf1N1B4_4972 0.84 +0.8 5,512,993 + -0.9 5,513,057 - -0.2 5,513,095 + +0.0 5,513,096 - -0.7 5,513,167 + Pf1N1B4_4973 0.22 -1.0 5,513,202 + Pf1N1B4_4973 0.35 +1.0 5,513,203 - Pf1N1B4_4973 0.35 +0.3 5,513,203 - Pf1N1B4_4973 0.35 +0.1 5,513,205 + Pf1N1B4_4973 0.36 +0.8 5,513,205 + Pf1N1B4_4973 0.36 +0.3 5,513,258 + Pf1N1B4_4973 0.54 -0.1 5,513,263 - Pf1N1B4_4973 0.56 -0.7 5,513,263 - Pf1N1B4_4973 0.56 +1.5 5,513,263 - Pf1N1B4_4973 0.56 -1.1 5,513,263 - Pf1N1B4_4973 0.56 +0.3 5,513,269 + Pf1N1B4_4973 0.58 -1.7 5,513,270 - Pf1N1B4_4973 0.59 +0.8 5,513,499 - Pf1N1B4_4974 0.14 -1.4 5,513,634 + Pf1N1B4_4974 0.38 -1.1 5,513,676 + +0.8 5,513,821 - Pf1N1B4_4974 0.72 -1.1 5,514,003 + -0.8 5,514,024 + +0.2 5,514,025 - +1.3 5,514,084 - -0.3 5,514,094 + +0.9 5,514,096 + +0.3 5,514,118 + +0.2 5,514,147 + -0.9 5,514,147 + +0.8 5,514,147 + +0.4 5,514,147 + -0.4 5,514,147 + -0.2 5,514,147 + -0.8 5,514,147 + -1.2 5,514,220 - -1.2 5,514,363 + -1.4 5,514,558 + -1.6 5,514,580 + -1.7 5,514,580 + -0.6 5,514,580 + -1.0 5,514,580 + -0.1 5,514,580 + -1.6 5,514,580 + +1.1 5,514,679 + +0.1 5,514,679 + -1.2 5,514,679 + +0.6 5,514,679 + -2.3 5,514,679 + -0.2 5,514,679 + +0.0 5,514,680 - -0.3 5,514,691 + +0.3 5,514,691 + +0.0 5,514,691 + +0.7 5,514,691 + +1.2 5,514,695 - -0.4 5,514,695 - +0.9 5,514,814 + +0.1 5,514,814 + +0.4 5,514,814 + +0.2 5,514,815 - -0.2 5,514,815 - -0.4 5,514,919 - Pf1N1B4_4975 0.34 -1.1
Or see this region's nucleotide sequence